Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APentapeptide_4e3nb2A2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
ASopA_Ce3nb2A1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)
BPentapeptide_4e3nb2B2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
BSopA_Ce3nb2B1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)
CPentapeptide_4e3nb2C2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
CSopA_Ce3nb2C1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)
DPentapeptide_4e3nb2D2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
DSopA_Ce3nb2D1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.160.20.80 Mainly Beta 3 Solenoid Pectate Lyase C-like E3 ubiquitin-protein ligase SopACATH (4.3.0)
A1.25.40.300 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Putative secreted effector proteinCATH (4.3.0)
A3.40.1850.10 Alpha Beta 3-Layer(aba) Sandwich HECT-like ubiquitin ligase fold HECT-like ubiquitin ligaseCATH (4.3.0)
A1.10.4140.10 Mainly Alpha Orthogonal Bundle effector protein (NleL) fold effector protein (NleL)CATH (4.3.0)
B2.160.20.80 Mainly Beta 3 Solenoid Pectate Lyase C-like E3 ubiquitin-protein ligase SopACATH (4.3.0)
B1.25.40.300 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Putative secreted effector proteinCATH (4.3.0)
B3.40.1850.10 Alpha Beta 3-Layer(aba) Sandwich HECT-like ubiquitin ligase fold HECT-like ubiquitin ligaseCATH (4.3.0)
B1.10.4140.10 Mainly Alpha Orthogonal Bundle effector protein (NleL) fold effector protein (NleL)CATH (4.3.0)
C2.160.20.80 Mainly Beta 3 Solenoid Pectate Lyase C-like E3 ubiquitin-protein ligase SopACATH (4.3.0)
C1.25.40.300 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Putative secreted effector proteinCATH (4.3.0)
C3.40.1850.10 Alpha Beta 3-Layer(aba) Sandwich HECT-like ubiquitin ligase fold HECT-like ubiquitin ligaseCATH (4.3.0)
C1.10.4140.10 Mainly Alpha Orthogonal Bundle effector protein (NleL) fold effector protein (NleL)CATH (4.3.0)
D2.160.20.80 Mainly Beta 3 Solenoid Pectate Lyase C-like E3 ubiquitin-protein ligase SopACATH (4.3.0)
D1.25.40.300 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Putative secreted effector proteinCATH (4.3.0)
D3.40.1850.10 Alpha Beta 3-Layer(aba) Sandwich HECT-like ubiquitin ligase fold HECT-like ubiquitin ligaseCATH (4.3.0)
D1.10.4140.10 Mainly Alpha Orthogonal Bundle effector protein (NleL) fold effector protein (NleL)CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13979SopA-like catalytic domain (SopA_C)SopA-like catalytic domainThis domain is found in the E. coli Type III secretion effector proteins SopA and NleL [1,2]. These proteins have been shown to act as E3 ubiquitin ligase enzymes. This domain contains the active site cysteine residue.Domain
A, B, C, D
PF13981SopA-like central domain (SopA)SopA-like central domainThis domain is found in the E. coli Type III secretion effector proteins SopA and NleL [1,2]. These proteins have been shown to act as E3 ubiquitin ligase enzymes.Domain
A, B, C, D
PF13599Pentapeptide repeats (9 copies) (Pentapeptide_4)Pentapeptide repeats (9 copies)- Repeat