3N0U
Crystal structure of Tm1821, the 8-oxoguanine DNA glycosylase of Thermotoga maritima
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22175 | e3n0uA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF22175 | ECOD (1.6) |
B | PF22175 | e3n0uB1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF22175 | ECOD (1.6) |
C | PF22175 | e3n0uC1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF22175 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1670.10 | Mainly Alpha | Orthogonal Bundle | Endonuclease Iii, domain 2 | Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | CATH (4.3.0) |
A | 1.10.340.30 | Mainly Alpha | Orthogonal Bundle | Endonuclease III | domain 1 | CATH (4.3.0) |
B | 1.10.1670.10 | Mainly Alpha | Orthogonal Bundle | Endonuclease Iii, domain 2 | Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | CATH (4.3.0) |
B | 1.10.340.30 | Mainly Alpha | Orthogonal Bundle | Endonuclease III | domain 1 | CATH (4.3.0) |
C | 1.10.1670.10 | Mainly Alpha | Orthogonal Bundle | Endonuclease Iii, domain 2 | Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | CATH (4.3.0) |
C | 1.10.340.30 | Mainly Alpha | Orthogonal Bundle | Endonuclease III | domain 1 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012092 | 8-oxoguanine DNA glycosylase/AP lyase Ogg | Family | |
IPR003265 | HhH-GPD domain | Domain | |
IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal | Homologous Superfamily | |
IPR011257 | DNA glycosylase | Homologous Superfamily |