3MX4

DNA binding and cleavage by the GIY-YIG endonuclease R.Eco29KI inactive variant E142Q

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGIY-YIG endonuclease8054053 3000597 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09517e3mx4A1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
BPF09517e3mx4B1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
CPF09517e3mx4C1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
DPF09517e3mx4D1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
EPF09517e3mx4E1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
FPF09517e3mx4F1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
GPF09517e3mx4G1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)
HPF09517e3mx4H1 A: a+b three layersX: GIY-YIG endonuclease (From Topology)H: GIY-YIG endonuclease (From Topology)T: GIY-YIG endonucleaseF: PF09517ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF09517Eco29kI restriction endonuclease (RE_Eco29kI)Eco29kI restriction endonuclease- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Eco29kIR - -
I, K, M, O
DNA (5'-D(P*CP*GP*GP*GP*AP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*GP*CP*CP*GP*C)-3')---
J, L, N, P
DNA (5'-D(P*GP*CP*GP*GP*CP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*TP*CP*CP*CP*G)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR018575Restriction endonuclease, type II, Eco29kIFamily