3MX4 | pdb_00003mx4

DNA binding and cleavage by the GIY-YIG endonuclease R.Eco29KI inactive variant E142Q

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGIY-YIG endonuclease 8054053 3000597 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
He3mx4H1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ge3mx4G1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Fe3mx4F1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ee3mx4E1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
De3mx4D1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ce3mx4C1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Be3mx4B1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)
Ae3mx4A1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF:ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
J, L, N, P
DNA (5'-D(P*GP*CP*GP*GP*CP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*TP*CP*CP*CP*G)-3')---
I, K, M, O
DNA (5'-D(P*CP*GP*GP*GP*AP*GP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*CP*GP*CP*CP*GP*C)-3')---
A, B, C, D, E
Eco29kIR - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR018575Restriction endonuclease, type II, Eco29kI, GIY-YIG domainDomain