Structure of sopB(155-272)-18mer complex, I23 form
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth P] | Peptidase_M99_C | e3mkwP1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Peptidase_M99_C | ECOD (v294.1) |
| C [auth B] | PBD | e3mkwB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: PEBP-like | F: PBD | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth P] | 1.10.10.2830 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) | |
| C [auth B] | 1.10.10.2830 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth U], B [auth T] | DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') | - | - | - |
| C [auth B], D [auth P] | Protein sopB | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth B], D [auth P] | IPR036086 | ParB/Sulfiredoxin superfamily | Homologous Superfamily |
| C [auth B], D [auth P] | IPR003115 | ParB-like, N-terminal domain | Domain |
| C [auth B], D [auth P] | IPR040873 | SopB, HTH domain | Domain |
| C [auth B], D [auth P] | IPR004437 | ParB/RepB/Spo0J partition protein | Domain |
