3LYS | pdb_00003lys

Crystal Structure of the N-terminal domain of the Prophage pi2 protein 01 (integrase) from Lactococcus lactis, Northeast Structural Genomics Consortium Target KR124F


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FPhage_int_SAM_3e3lysF1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)
EPhage_int_SAM_3e3lysE1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)
DPhage_int_SAM_3e3lysD1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)
CPhage_int_SAM_3e3lysC1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)
BPhage_int_SAM_3e3lysB1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)
APhage_int_SAM_3e3lysA1 A: alpha arraysX: lambda integrase-N-likeH: lambda integrase-N (From Topology)T: lambda integrase-NF: Phage_int_SAM_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
E1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
D1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
C1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
B1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011010DNA breaking-rejoining enzyme, catalytic coreHomologous Superfamily
A, B, C, D, E
IPR010998Integrase/recombinase, N-terminalHomologous Superfamily
A, B, C, D, E
IPR050090Bacterial tyrosine recombinase XerC/XerD complexFamily
A, B, C, D, E
IPR044068Core-binding (CB) domainDomain
A, B, C, D, E
IPR002104Integrase, catalytic domainDomain
A, B, C, D, E
IPR013762Integrase-like, catalytic domain superfamilyHomologous Superfamily