Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3lwvb_ Small proteins Rubredoxin-like Nop10-like SnoRNP Nucleolar RNA-binding protein Nop10-like automated matches (Pyrococcus furiosus ) [TaxId: 2261 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPseudouridine synthase8040330 3001360 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPUA domain-like8040329 3001015 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNop10-like SnoRNP Znf-like8040332 3000486 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyL30e-like8033057 3001739 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF01472e3lwvA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: PF01472ECOD (1.6)
APF01509,PF08068,PF16198e3lwvA2 A: a+b two layersX: Alpha-beta plaitsH: Pseudouridine synthase (From Topology)T: Pseudouridine synthaseF: PF01509,PF08068,PF16198ECOD (1.6)
BPF04135e3lwvB1 A: few secondary structure elementsX: Rubredoxin-likeH: Nucleolar RNA-binding protein Nop10-like (From Topology)T: Nucleolar RNA-binding protein Nop10-likeF: PF04135ECOD (1.6)
CPF01248e3lwvC1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08068DKCLD (NUC011) domain (DKCLD)DKCLD (NUC011) domainThis is a TruB_N/PUA domain associated N-terminal domain of Dyskerin-like proteins [1].Domain
PF16198tRNA pseudouridylate synthase B C-terminal domain (TruB_C_2)tRNA pseudouridylate synthase B C-terminal domain- Family
PF01509TruB family pseudouridylate synthase (N terminal domain) (TruB_N)TruB family pseudouridylate synthase (N terminal domain)- Family
PF01472PUA domain (PUA)PUA domain- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Pseudouridine synthase Cbf5 -
Ribosome biogenesis protein Nop10
50S ribosomal protein L7Ae
H/ACA RNA---
5'-R(*GP*AP*GP*CP*GP*(du)P*GP*CP*GP*GP*UP*UP*U)-3'---