3LO3 | pdb_00003lo3

The crystal structure of a conserved functionally unknown protein from Colwellia psychrerythraea 34H.


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Zd3lo3z1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Zd3lo3z2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Yd3lo3y1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Yd3lo3y2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Xd3lo3x1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Xd3lo3x2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Wd3lo3w1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Wd3lo3w2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Vd3lo3v1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Vd3lo3v2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ud3lo3u1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ud3lo3u2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Td3lo3t1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Td3lo3t2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Sd3lo3s1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Sd3lo3s2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Rd3lo3r1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Rd3lo3r2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Qd3lo3q1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Qd3lo3q2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Pd3lo3p1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Pd3lo3p2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Od3lo3o1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Od3lo3o2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Nd3lo3n1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Nd3lo3n2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Md3lo3m1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Md3lo3m2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ld3lo3l1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ld3lo3l2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Kd3lo3k1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Kd3lo3k2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Jd3lo3j1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Jd3lo3j2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Id3lo3i1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Id3lo3i2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Hd3lo3h1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Hd3lo3h2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Gd3lo3g1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Gd3lo3g2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Fd3lo3f1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Fd3lo3f2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ed3lo3e1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ed3lo3e2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Dd3lo3d1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Dd3lo3d2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Cd3lo3c1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Cd3lo3c2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Bd3lo3b1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Bd3lo3b2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ad3lo3a1 Alpha and beta proteins (a+b) Ferredoxin-like Dimeric alpha+beta barrel automated matches automated matches Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)
Ad3lo3a2 Artifacts Tags Tags Tags N-terminal Tags Vibrio psychroerythus (Colwellia psychrerythraea 34H ) [TaxId: 167879 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
USCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
CSCOP2 FamilyAtu0297-like 8060407 4003602 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2 (2022-06-29)
BA [auth b]SCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDimeric alpha+beta barrel 8060408 3000089 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZRVPe3lo3Z1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
YRVPe3lo3Y1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
XRVPe3lo3X1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
WRVPe3lo3W1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
VRVPe3lo3V1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
URVPe3lo3U1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
TRVPe3lo3T1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
SRVPe3lo3S1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
RRVPe3lo3R1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
QRVPe3lo3Q1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
PRVPe3lo3P1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
ORVPe3lo3O1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
NRVPe3lo3N1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
MRVPe3lo3M1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
LRVPe3lo3L1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
KRVPe3lo3K1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
JRVPe3lo3J1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
IRVPe3lo3I1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
HRVPe3lo3H1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
GRVPe3lo3G1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
FRVPe3lo3F1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
ERVPe3lo3E1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
DRVPe3lo3D1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
CRVPe3lo3C1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
BA [auth b]RVPe3lo3b1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
BRVPe3lo3B1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
AA [auth a]RVPe3lo3a1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (develop294)
ASRF-TFe3lo3A1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: HTHT: winged helix domainF: SRF-TFECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
Z3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
Y3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
X3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
W3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
V3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
U3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
T3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
S3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
R3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
Q3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
P3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
O3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
N3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
M3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
L3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
K3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
J3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
I3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
H3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
G3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
F3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
E3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
D3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
C3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
BA [auth b]3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
B3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
AA [auth a]3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A3.30.70.100 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage