3LET | pdb_00003let

Crystal Structure of Fic domain containing AMPylator, VopS

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	RVP	e3letB1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.1)
A	Fic	e3letA2	A: a/b three-layered sandwiches	X: Alpha-helical domain in upper collar protein	H: Alpha-helical domain in upper collar protein	T: Alpha-helical domain in upper collar protein	F: Fic	ECOD (v294.1)
A	VopS_N	e3letA1	A: a/b three-layered sandwiches	X: N-terminal domain in adenosine monophosphate-protein transferase vopS	H: N-terminal domain in adenosine monophosphate-protein transferase vopS	T: N-terminal domain in adenosine monophosphate-protein transferase vopS	F: VopS_N	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.3290.10	Mainly Alpha	Orthogonal Bundle	Fic-like fold	Fido-like domain	CATH (4.3.0)
A	1.10.3290.10	Mainly Alpha	Orthogonal Bundle	Fic-like fold	Fido-like domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Adenosine monophosphate-protein transferase vopS	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding small GTPase binding protein binding enzyme binding GTPase binding adenylyltransferase activity transferase activity nucleotidyltransferase activity catalytic activity AMPylase activity transferase activity, transferring phosphorus-containing groups	cellular response to stimulus symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms regulation of cellular process small GTPase-mediated signal transduction response to stimulus signaling regulation of small GTPase mediated signal transduction regulation of signal transduction intracellular signal transduction biological process involved in symbiotic interaction cell communication symbiont-mediated perturbation of host process regulation of intracellular signal transduction intracellular signaling cassette cellular response to stimulus symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms regulation of cellular process small GTPase-mediated signal transduction response to stimulus signaling regulation of small GTPase mediated signal transduction regulation of signal transduction intracellular signal transduction biological process involved in symbiotic interaction cell communication symbiont-mediated perturbation of host process regulation of intracellular signal transduction intracellular signaling cassette signal transduction symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism regulation of biological process regulation of signaling symbiont-mediated perturbation of host small GTPase-mediated signal transduction biological regulation biological process involved in interaction with host regulation of response to stimulus regulation of cell communication cellular process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036597	Fido-like domain superfamily	Homologous Superfamily
A, B	IPR003812	Fido domain	Domain
A, B	IPR049418	VopS, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.