Crystal structure of B.licheniformis Anti-TRAP protein, an antagonist of TRAP-RNA interactions
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| VA [auth m] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| UA [auth l] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| TA [auth k] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| SA [auth j] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| RA [auth i] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| QA [auth h] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| PA [auth g] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| OA [auth f] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| NA [auth e] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| MA [auth d] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| LA [auth c] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| KA [auth b] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| JA [auth a] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| IA [auth 9] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| HA [auth 8] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| GA [auth 7] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| FA [auth 6] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| EA [auth 5] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| DA [auth 4] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| CA [auth 3] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| BA [auth 2] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| AA [auth 1] | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | DnaJ/Hsp40 cysteine-rich domain-like | 8055692 | 3001550 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z | e3ld0Z1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| Y | e3ld0Y1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| X | e3ld0X1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| W | e3ld0W1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| VA [auth m] | e3ld0m1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| V | e3ld0V1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| UA [auth l] | e3ld0l1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| U | e3ld0U1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| TA [auth k] | e3ld0k1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| T | e3ld0T1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| SA [auth j] | e3ld0j1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| S | e3ld0S1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| RA [auth i] | e3ld0i1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| R | e3ld0R1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| QA [auth h] | e3ld0h1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| Q | e3ld0Q1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| PA [auth g] | e3ld0g1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| P | e3ld0P1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| OA [auth f] | e3ld0f1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| O | e3ld0O1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| NA [auth e] | e3ld0e1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| N | e3ld0N1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| MA [auth d] | e3ld0d1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| M | e3ld0M1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| LA [auth c] | e3ld0c1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| L | e3ld0L1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| KA [auth b] | e3ld0b1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| K | e3ld0K1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| JA [auth a] | e3ld0a1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| J | e3ld0J1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| IA [auth 9] | e3ld091 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| I | e3ld0I1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| HA [auth 8] | e3ld081 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| H | e3ld0H1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| GA [auth 7] | e3ld071 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| G | e3ld0G1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| FA [auth 6] | e3ld061 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| F | e3ld0F1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| EA [auth 5] | e3ld051 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| E | e3ld0E1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| DA [auth 4] | e3ld041 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| D | e3ld0D1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| CA [auth 3] | e3ld031 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| C | e3ld0C1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| BA [auth 2] | e3ld021 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| B | e3ld0B1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| AA [auth 1] | e3ld011 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) | |
| A | e3ld0A1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: Tachylectin | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF15777 | Tryptophan RNA-binding attenuator protein inhibitory protein (Anti-TRAP) | Tryptophan RNA-binding attenuator protein inhibitory protein | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR031538 | Tryptophan RNA-binding attenuator protein inhibitory protein | Family | |
| IPR036410 | Heat shock protein DnaJ, cysteine-rich domain superfamily | Homologous Superfamily |














