3L8R | pdb_00003l8r

The crystal structure of PtcA from S. mutans

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d3l8rh_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
G	d3l8rg_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
F	d3l8rf_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
E	d3l8re_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
D	d3l8rd_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
C	d3l8rc_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
B	d3l8rb_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)
A	d3l8ra_	All alpha proteins	Spectrin repeat-like	Enzyme IIa from lactose specific PTS, IIa-lac	automated matches	automated matches	(Streptococcus mutans ) [TaxId: 1309 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2B (2022-06-29)
A	SCOP2 Family	Enzyme IIa from lactose specific PTS, IIa-lac	8078906	4000774	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Enzyme IIa from lactose specific PTS, IIa-lac	8078907	3001316	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	PTS_IIA	e3l8rH1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
G	PTS_IIA	e3l8rG1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
F	PTS_IIA	e3l8rF1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
E	PTS_IIA	e3l8rE1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
D	PTS_IIA	e3l8rD1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
C	PTS_IIA	e3l8rC1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
B	PTS_IIA	e3l8rB1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)
A	PTS_IIA	e3l8rA1	A: alpha bundles	X: Spectrin repeat-like	H: Enzyme IIa from lactose specific PTS, IIa-lac (From Topology)	T: Enzyme IIa from lactose specific PTS, IIa-lac	F: PTS_IIA	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
G	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
F	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
E	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
D	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
C	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	1.20.58.80	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit (PTS_IIA)	PTS system, Lactose/Cellobiose specific IIA subunit	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structural ...	The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilised by a centrally located metal ion [1]. Separation into subunits is thought to occur after phosphorylation.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Putative PTS system, cellobiose-specific IIA component	cation binding ion binding binding metal ion binding small molecule binding transferase activity catalytic activity	import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system transport import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport establishment of localization transmembrane transport localization cellular process carbohydrate transmembrane transport	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036542	Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003188	Phosphotransferase system, lactose/cellobiose-type IIA subunit	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.