3L49 | pdb_00003l49

CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3l49d1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Dd3l49d2 Artifacts Tags Tags Tags N-terminal Tags (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Cd3l49c1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Cd3l49c2 Artifacts Tags Tags Tags N-terminal Tags (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Bd3l49b1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Bd3l49b2 Artifacts Tags Tags Tags N-terminal Tags (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Ad3l49a1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)
Ad3l49a2 Artifacts Tags Tags Tags N-terminal Tags (Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DALOe3l49D2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ALOECOD (v294.1)
DDctPe3l49D1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: DctPECOD (v294.1)
CALOe3l49C2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ALOECOD (v294.1)
CDctPe3l49C3 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: DctPECOD (v294.1)
BALOe3l49B2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ALOECOD (v294.1)
BDctPe3l49B3 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: DctPECOD (v294.1)
AALOe3l49A2 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ALOECOD (v294.1)
ADctPe3l49A1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: DctPECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
C3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13407Periplasmic binding protein domain (Peripla_BP_4)Periplasmic binding protein domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR025997Periplasmic binding proteinDomain
A, B, C, D
IPR028082Periplasmic binding protein-like IHomologous Superfamily