The crystal structure of fatty acid AMP ligase from Legionella pneumophila
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | AMP-binding_3rd | e3kxwA7 | A: beta barrels | X: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology) | H: beta-barrel domain in acetyl-CoA synthetase-like proteins (From Topology) | T: beta-barrel domain in acetyl-CoA synthetase-like proteins | F: AMP-binding_3rd | ECOD (1.6) |
| A | AMP-binding_C_2_1 | e3kxwA4 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: a+b domain in acetyl-CoA synthetase-like proteins (From Topology) | T: a+b domain in acetyl-CoA synthetase-like proteins | F: AMP-binding_C_2_1 | ECOD (1.6) |
| A | AMP-binding_1st | e3kxwA6 | A: a/b three-layered sandwiches | X: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology) | H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology) | T: Rossmann-like domain in Acetyl-CoA synthetase-like proteins | F: AMP-binding_1st | ECOD (1.6) |
| A | AMP-binding_2nd | e3kxwA5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology) | H: Rossmann-like domain in Acetyl-CoA synthetase-like proteins (From Topology) | T: Rossmann-like domain in Acetyl-CoA synthetase-like proteins | F: AMP-binding_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.300.30 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00501 | AMP-binding enzyme (AMP-binding) | AMP-binding enzyme | - | Family | |
| PF23024 | Disco-interacting protein 2-like, AMP domain (AMP-dom_DIP2-like) | Disco-interacting protein 2-like, AMP domain | This domain is found in Disco-interacting protein 2 from Drosophila melanogaster (DIP2) and similar sequences from eukaryotes and bacteria. DIP2 is required for precise axonal bifurcation in mushroom body neurons and may play a role in fatty acid met ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR042099 | ANL, N-terminal domain | Homologous Superfamily | |
| IPR045851 | AMP-binding enzyme domain superfamily | Homologous Superfamily | |
| IPR025110 | AMP-binding enzyme, C-terminal domain | Domain | |
| IPR000873 | AMP-dependent synthetase/ligase domain | Domain | |
| IPR040097 | Fatty acyl-AMP ligase /fatty acyl-CoA ligase | Family |














