Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22027e3kqhA5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: PF22027ECOD (1.6)
AF_UNCLASSIFIEDe3kqhA4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: F_UNCLASSIFIEDECOD (1.6)
APF07652e3kqhA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF07652ECOD (1.6)
BPF22027e3kqhB5 A: alpha arraysX: C-terminal helical domain of RNA helicase (From Topology)H: C-terminal helical domain of RNA helicase (From Topology)T: C-terminal helical domain of RNA helicaseF: PF22027ECOD (1.6)
BF_UNCLASSIFIEDe3kqhB4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: F_UNCLASSIFIEDECOD (1.6)
BPF07652e3kqhB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF07652ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07652Flavivirus DEAD domain (Flavi_DEAD)Flavivirus DEAD domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Serine protease/NTPase/helicase NS3
C, D
5'-D(*AP*AP*AP*AP*AP*A)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR002522Hepatitis C virus, Core protein, N-terminalDomain
A, B
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A, B
IPR038568Hepatitis C virus NS5A, 1B domain superfamilyHomologous Superfamily
A, B
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B
IPR001650Helicase, C-terminal domain-likeDomain
A, B
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A, B
IPR002868Hepatitis C virus, Non-structural 5a proteinDomain
A, B
IPR038170NS5A domain 1a superfamilyHomologous Superfamily
A, B
IPR002518Hepatitis C virus, Non-structural protein NS2Domain
A, B
IPR013192Hepatitis C virus, Non-structural 5a protein, domain 1aDomain
A, B
IPR002521Hepatitis C virus, Core protein, C-terminalDomain
A, B
IPR042209Hepatitis C virus non-structural protein NS2, N-terminal domainHomologous Superfamily
A, B
IPR000745Hepatitis C virus, Non-structural protein NS4aDomain
A, B
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A, B
IPR042205Hepatitis C virus non-structural protein NS2, C-terminal domainHomologous Superfamily
A, B
IPR002166RNA dependent RNA polymerase, hepatitis C virusFamily
A, B
IPR002519Hepatitis C virus, Envelope glycoprotein E1Domain
A, B
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, B
IPR044896Hepatitis C virus core protein, chain A superfamilyHomologous Superfamily
A, B
IPR024350Hepatitus C virus, Non-structural 5a protein, C-terminalDomain
A, B
IPR013193Hepatitis C virus non-structural 5a, 1B domainDomain
A, B
IPR004109Hepatitis C virus, NS3 proteaseDomain
A, B
IPR002531Hepatitis C virus, Non-structural protein E2/NS1Domain
A, B
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A, B
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A, B
IPR001490Hepatitis C virus, Non-structural protein NS4bDomain