Crystal structure of CBM42A from Clostridium thermocellum
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | AbfB | e3kmvA1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| B | AbfB | e3kmvB1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| D | AbfB | e3kmvD1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| E | AbfB | e3kmvE1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| F | AbfB | e3kmvF1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| H | AbfB | e3kmvH1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| G | AbfB | e3kmvG1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
| C | AbfB | e3kmvC1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: AbfB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| D | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| E | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| F | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| H | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| G | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| C | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002105 | Dockerin type I repeat | Repeat | |
| IPR007934 | Alpha-L-arabinofuranosidase B, arabinose-binding domain | Domain | |
| IPR023296 | Glycosyl hydrolase, five-bladed beta-propeller domain superfamily | Homologous Superfamily | |
| IPR016134 | Dockerin domain | Domain | |
| IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
| IPR036195 | Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily | Homologous Superfamily | |
| IPR032291 | Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal | Domain | |
| IPR050727 | Glycosyl hydrolase 43 family arabinanases | Family | |
| IPR036439 | Dockerin domain superfamily | Homologous Superfamily | |
| IPR006710 | Glycoside hydrolase, family 43 | Family |














