3KL2 | pdb_00003kl2

Crystal structure of a putative isochorismatase from Streptomyces avermitilis

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ld3kl2l1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Ld3kl2l2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Kd3kl2k1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Kd3kl2k2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Jd3kl2j_ Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Id3kl2i_ Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Hd3kl2h_ Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Gd3kl2g1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Gd3kl2g2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Fd3kl2f1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Fd3kl2f2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Ed3kl2e1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Ed3kl2e2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Dd3kl2d1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Dd3kl2d2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Cd3kl2c1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Cd3kl2c2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Bd3kl2b1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Bd3kl2b2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Ad3kl2a1 Alpha and beta proteins (a/b) Isochorismatase-like hydrolases Isochorismatase-like hydrolases automated matches automated matches (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)
Ad3kl2a2 Artifacts Tags Tags Tags C-terminal Tags (Streptomyces avermitilis ) [TaxId: 33903 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)
BSCOP2 FamilyIsochorismatase-like hydrolases 8065883 4000591 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyIsochorismatase-like hydrolases 8065884 3001778 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Le3kl2L1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ke3kl2K1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Je3kl2J1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ie3kl2I1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
He3kl2H1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ge3kl2G1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Fe3kl2F1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ee3kl2E1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
De3kl2D1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ce3kl2C1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Be3kl2B1 A: Alpha-beta plaitsX: Phage tail protein-likeH: Transmembrane protein 14AT: Glyco_hydro_30F:ECOD (20:10:01)
Ae3kl2A1 A: Cystatin-likeX: NTF2-likeH: NTF2-likeT: MacroF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
K3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
J3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
I3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
H3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
G3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
F3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
E3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
D3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
C3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
B3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)
A3.40.50.850 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Isochorismatase-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00857Isochorismatase domain (Isochorismatase)Isochorismatase domainThis is a domain found in hydrolase enzymes. This domain is responsible for the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate. It shows a typical helix-sheet-helix sandwich structural architecture, with ...This is a domain found in hydrolase enzymes. This domain is responsible for the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate. It shows a typical helix-sheet-helix sandwich structural architecture, with a central beta--sheet made of six parallel strands, three alpha -helices on one side and two on the other [3,4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Putative isochorismatase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR000868Isochorismatase-like domainDomain
A, B, C, D, E
IPR050272Isochorismatase-like hydrolaseFamily
A, B, C, D, E
IPR036380Isochorismatase-like superfamilyHomologous Superfamily