3KKE
Crystal structure of a LacI family transcriptional regulator from Mycobacterium smegmatis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d3kkeb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
A | d3kkea_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
C | d3kkec_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
D | d3kked_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like I | Periplasmic binding protein-like I | automated matches | automated matches | (Mycolicibacterium smegmatis MC2 155 ) [TaxId: 246196 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00532 | e3kkeB3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF00532 | ECOD (1.6) |
B | PF13377 | e3kkeB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF13377 | ECOD (1.6) |
A | PF00532 | e3kkeA3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF00532 | ECOD (1.6) |
A | PF13377 | e3kkeA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF13377 | ECOD (1.6) |
C | PF00532 | e3kkeC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF00532 | ECOD (1.6) |
C | PF13377 | e3kkeC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF13377 | ECOD (1.6) |
D | PF00532 | e3kkeD3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF00532 | ECOD (1.6) |
D | PF13377 | e3kkeD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Periplasmic binding protein-like I | F: PF13377 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
C | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
D | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13377 | Periplasmic binding protein-like domain (Peripla_BP_3) | Periplasmic binding protein-like domain | This domain is found in a variety of transcriptional regulatory proteins. It is related to bacterial periplasmic binding proteins, although this domain is unlikely to be found in the periplasm. This domain acts as a sensor binding small molecule liga ... | Domain | |
PF00356 | Bacterial regulatory proteins, lacI family (LacI) | Bacterial regulatory proteins, lacI family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046335 | Transcriptional regulator LacI/GalR-like, sensor domain | Domain | |
IPR000843 | LacI-type HTH domain | Domain | |
IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |