3KFB | pdb_00003kfb

Crystal structure of a group II chaperonin from Methanococcus maripaludis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HPBPe3kfbH1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
GPBPe3kfbG1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
FPBPe3kfbF1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
EPBPe3kfbE1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
DPBPe3kfbD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
CPBPe3kfbC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
BPBPe3kfbB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (v294.1)
AManC_GMP_beta-helixe3kfbA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Cu,Zn superoxide dismutase-likeF: ManC_GMP_beta-helixECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
H3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
G3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
F3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
E3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
D3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
C3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
B3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
A3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00118TCP-1/cpn60 chaperonin family (Cpn60_TCP1)TCP-1/cpn60 chaperonin family- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR053374TCP-1_chaperoninUnknown
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR054827TCP-1 chaperonin-likeFamily
A, B, C, D, E
IPR012714Chaperonin/ThermosomeFamily
A, B, C, D, E
IPR017998T-complex protein 1Family
A, B, C, D, E
IPR002194Chaperonin TCP-1, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily