3KDS
apo-FtsH crystal structure
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038719 | 3002019 | SCOP2B (2022-06-29) |
A [auth E] | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104159 | 3002834 | SCOP2B (2022-06-29) |
A [auth E] | SCOP2B Superfamily | FtsH protease domain-like | 8038717 | 3002004 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038719 | 3002019 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | FtsH protease domain-like | 8038717 | 3002004 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104159 | 3002834 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | FtsH protease domain-like | 8038717 | 3002004 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8038719 | 3002019 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | DNA polymerases epsilon, N-terminal domain (Dpoe2NT)-like | 8104159 | 3002834 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PRK03992 | e3kdsE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
A [auth E] | Peptidase_M41 | e3kdsE2 | A: alpha arrays | X: FtsH protease domain-like (From Topology) | H: FtsH protease domain-like (From Topology) | T: FtsH protease domain-like | F: Peptidase_M41 | ECOD (1.6) |
A [auth E] | Sigma54_activat | e3kdsE3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
B [auth F] | PRK03992 | e3kdsF3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
B [auth F] | Peptidase_M41 | e3kdsF1 | A: alpha arrays | X: FtsH protease domain-like (From Topology) | H: FtsH protease domain-like (From Topology) | T: FtsH protease domain-like | F: Peptidase_M41 | ECOD (1.6) |
B [auth F] | Sigma54_activat | e3kdsF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
C [auth G] | PRK03992 | e3kdsG3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
C [auth G] | Peptidase_M41 | e3kdsG1 | A: alpha arrays | X: FtsH protease domain-like (From Topology) | H: FtsH protease domain-like (From Topology) | T: FtsH protease domain-like | F: Peptidase_M41 | ECOD (1.6) |
C [auth G] | Sigma54_activat | e3kdsG2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E], B [auth F], C [auth G] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
A [auth E], B [auth F], C [auth G] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
A [auth E], B [auth F], C [auth G] | PF01434 | Peptidase family M41 (Peptidase_M41) | Peptidase family M41 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | AAA-ATPase superfamily, transmembrane | FtsH zinc metalloprotease |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Membrane-Bound Metalloproteases | apo-FtsH ATP-dependent metalloprotease |