CRYSTAL STRUCTURE OF A PUTATIVE PROTEASE (BDI_1141) FROM PARABACTEROIDES DISTASONIS ATCC 8503 AT 2.00 A RESOLUTION
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Glyco_hydro_30 | e3kd4B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Glyco_hydro_30 | ECOD (v294.2) |
| A | DUF3857 | e3kd4A1 | A: beta barrels | X: Baculovirus p35 protein-related | H: Baculovirus p35 protein-related | T: Baculovirus p35 protein-related | F: DUF3857 | ECOD (v294.2) |
| A | Disintegrin | e3kd4A2 | A: beta barrels | X: Hormone receptor domain (HRM, Pfam 02793) | H: Hormone receptor domain (HRM, Pfam 02793) | T: Hormone receptor domain (HRM, Pfam 02793) | F: Disintegrin | ECOD (v294.2) |
| A | DUF3858 | e3kd4A3 | A: beta barrels | X: C-terminal domain in putative protease YP_001302526.1 | H: C-terminal domain in putative protease YP_001302526.1 | T: C-terminal domain in putative protease YP_001302526.1 | F: DUF3858 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.3140 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| B | 3.10.620.30 | Alpha Beta | Roll | C8orf32 fold | CATH (4.3.0) | |
| B | 2.60.120.1130 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| A | 2.60.40.3140 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
| A | 3.10.620.30 | Alpha Beta | Roll | C8orf32 fold | CATH (4.3.0) | |
| A | 2.60.120.1130 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF12970 | Domain of Unknown Function with PDB structure (DUF3858) (DUF3858) | Domain of Unknown Function with PDB structure (DUF3858) | - | Family | |
| PF12969 | Domain of Unknown Function with PDB structure (DUF3857) (DUF3857) | Domain of Unknown Function with PDB structure (DUF3857) | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR024618 | Domain of unknown function DUF3857 | Domain | |
| IPR024544 | Domain of unknown function DUF3858 | Domain |
