3JWI | pdb_00003jwi

Crystal structure analysis of the methyltransferase domain of bacterial-CtHen1-CN

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e3jwiB1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: PDEase_I	F:	ECOD (20:10:01)
A		e3jwiA1	A: Alpha-beta plaits	X: Phage tail protein-like	H: Transmembrane protein 14A	T: PDEase_I	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)
A	3.40.50.150	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Vaccinia Virus protein VP39	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08242	Methyltransferase domain (Methyltransf_12)	Methyltransferase domain	Members of this family are SAM dependent methyltransferases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Methyltransferase type 12	RNA binding binding nucleic acid binding cation binding ion binding metal ion binding small molecule binding RNA methyltransferase activity O-methyltransferase activity catalytic activity, acting on RNA small RNA 2'-O-methyltransferase activity transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity RNA binding binding nucleic acid binding cation binding ion binding metal ion binding small molecule binding RNA methyltransferase activity O-methyltransferase activity catalytic activity, acting on RNA small RNA 2'-O-methyltransferase activity transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity methyltransferase activity catalytic activity RNA 2'-O-methyltransferase activity identical protein binding protein binding	RNA metabolic process primary metabolic process nucleic acid metabolic process macromolecule methylation nucleobase-containing compound metabolic process RNA modification methylation macromolecule modification metabolic process cellular process macromolecule metabolic process RNA methylation regulation of biosynthetic process regulation of biological process RNA metabolic process primary metabolic process nucleic acid metabolic process macromolecule methylation nucleobase-containing compound metabolic process RNA modification methylation macromolecule modification metabolic process cellular process macromolecule metabolic process RNA methylation regulation of biosynthetic process regulation of biological process regulation of cellular process negative regulation of metabolic process biological regulation negative regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulatory ncRNA-mediated gene silencing regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of cellular process regulation of macromolecule biosynthetic process regulation of metabolic process negative regulation of macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR024026	3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial	Family
A, B	IPR013217	Methyltransferase type 12	Domain
A, B	IPR038546	Hen1, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A, B	IPR026610	3'-RNA ribose 2'-O-methyltransferase, Hen1	Family
A, B	IPR024740	Hen1, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.