Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3jsea_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Bd3jseb_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Cd3jsec_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Dd3jsed_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ed3jsee_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Fd3jsef_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Gd3jseg_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Hd3jseh_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Id3jsei_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Jd3jsej_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Kd3jsek_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ld3jsel_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Md3jsem_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Nd3jsen_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits Proteasome beta subunit (catalytic) (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Od3jseo_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Pd3jsep_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Qd3jseq_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Rd3jser_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Sd3jses_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Td3jset_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Ud3jseu_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
USCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AProteasomee3jseA1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
BProteasomee3jseB1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
CProteasomee3jseC1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
DProteasomee3jseD1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
EProteasomee3jseE1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
FProteasomee3jseF1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
GProteasomee3jseG1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
HProteasomee3jseH1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
IProteasomee3jseI1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
JProteasomee3jseJ1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
KProteasomee3jseK1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
LProteasomee3jseL1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
MProteasomee3jseM1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
NProteasomee3jseN1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
OPA28_beta_1e3jseO1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
PPA28_beta_1e3jseP1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
QPA28_beta_1e3jseQ1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
RPA28_beta_1e3jseR1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
SPA28_beta_1e3jseS1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
TPA28_beta_1e3jseT1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
UPA28_beta_1e3jseU1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
B3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
C3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
D3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
E3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
F3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
G3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
H3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
I3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
J3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
K3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
L3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
M3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
N3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
O1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
P1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
Q1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
R1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
S1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
T1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
U1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A, B, C, D, E
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
H, I, J, K, L
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
O, P, Q, R, S
PF02252Proteasome activator pa28 beta subunit (PA28_beta)Proteasome activator pa28 beta subunit- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Proteasome subunit alpha
H, I, J, K, L
Proteasome subunit beta
O, P, Q, R, S
Proteasome activator protein PA26-

InterPro: Protein Family Classification InterPro Database Homepage