3JBP

Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth R]SCOP2B SuperfamilyL30e-like8063972 3001739 SCOP2B (2022-06-29)
K [auth O]SCOP2B SuperfamilyWinged helix DNA-binding domain8055711 3000034 SCOP2B (2022-06-29)
M [auth Z]SCOP2 FamilyRibosomal protein S21e8048777 4006215 SCOP2 (2022-06-29)
M [auth Z]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053137 3000068 SCOP2 (2022-06-29)
P [auth 3]SCOP2 FamilyRibosomal protein S26e8048840 4006236 SCOP2 (2022-06-29)
P [auth 3]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053146 3000068 SCOP2 (2022-06-29)
R [auth 5]SCOP2B SuperfamilyNucleic acid-binding proteins8063420 3000135 SCOP2B (2022-06-29)
S [auth 6]SCOP2B SuperfamilyRibosomal protein S30e-like8053452 3002190 SCOP2B (2022-06-29)
T [auth B]SCOP2 FamilyRibosomal S3Ae8048447 4006095 SCOP2 (2022-06-29)
T [auth B]SCOP2 SuperfamilyRibosomal S3Ae-like8053207 3002166 SCOP2 (2022-06-29)
U [auth F]SCOP2 FamilyEukaryotic ribosomal protein S4e-like8050330 4006847 SCOP2 (2022-06-29)
U [auth F]SCOP2 FamilyCold shock DNA-binding domain-like8048392 4001909 SCOP2 (2022-06-29)
U [auth F]SCOP2 FamilyRibosomal protein S4e C-terminal KOW domain-like8044900 4004197 SCOP2 (2022-06-29)
U [auth F]SCOP2 SuperfamilyAlpha-L RNA-binding motif8052748 3001473 SCOP2 (2022-06-29)
U [auth F]SCOP2 SuperfamilyNucleic acid-binding proteins8052749 3000135 SCOP2 (2022-06-29)
U [auth F]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052750 3000334 SCOP2 (2022-06-29)
V [auth H]SCOP2 FamilyRibosomal protein S6e8048563 4006143 SCOP2 (2022-06-29)
V [auth H]SCOP2 SuperfamilyGS N-terminal domain-like8053165 3000408 SCOP2 (2022-06-29)
X [auth L]SCOP2 FamilyRibosomal protein S8e8048713 4006189 SCOP2 (2022-06-29)
X [auth L]SCOP2 Superfamily50S Ribosomal protein L14-like8053078 3000433 SCOP2 (2022-06-29)
Y [auth N]SCOP2B SuperfamilyRibosomal protein S108100154 3001336 SCOP2B (2022-06-29)
BA [auth S]SCOP2B SuperfamilyS13-like H2TH domain8100146 3000053 SCOP2B (2022-06-29)
CA [auth T]SCOP2 FamilyRibosomal protein S14p/S29e8047573 4003647 SCOP2 (2022-06-29)
CA [auth T]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052571 3000068 SCOP2 (2022-06-29)
DA [auth U]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S138052963 4000767 SCOP2 (2022-06-29)
DA [auth U]SCOP2 Family40S Ribosomal protein S13 N-terminal domain-like8050310 4006843 SCOP2 (2022-06-29)
DA [auth U]SCOP2 SuperfamilyS15/NS1 RNA-binding domain8052965 3001284 SCOP2 (2022-06-29)
DA [auth U]SCOP2 SuperfamilyHomeodomain-like8052964 3000001 SCOP2 (2022-06-29)
EA [auth V]SCOP2 FamilyCold shock DNA-binding domain-like8052725 4001909 SCOP2 (2022-06-29)
EA [auth V]SCOP2 FamilyRibosomal S17 N-terminal domain-like8045085 4004290 SCOP2 (2022-06-29)
EA [auth V]SCOP2 SuperfamilyNucleic acid-binding proteins8052726 3000135 SCOP2 (2022-06-29)
EA [auth V]SCOP2 SuperfamilyRibosomal S17 N-terminal domain-like8052724 3002138 SCOP2 (2022-06-29)
GA [auth C]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063816 3001397 SCOP2B (2022-06-29)
KA [auth AL]SCOP2B SuperfamilyRibosomal protein L13e-like8053153 3002162 SCOP2B (2022-06-29)
LA [auth A1]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053055 3000334 SCOP2B (2022-06-29)
NA [auth A4]SCOP2B SuperfamilyRibosomal protein L29e8053042 3002157 SCOP2B (2022-06-29)
OA [auth A6]SCOP2B SuperfamilyL30e-like8077495 3001739 SCOP2B (2022-06-29)
SA [auth A9]SCOP2B SuperfamilyTranslational proteins8087449 3000811 SCOP2B (2022-06-29)
TA [auth Aa]SCOP2B SuperfamilyRibosomal protein L34e-like8053541 3002203 SCOP2B (2022-06-29)
UA [auth Ab]SCOP2B SuperfamilyRibosomal protein L36e8053116 3002161 SCOP2B (2022-06-29)
VA [auth Ad]SCOP2B SuperfamilyRibosomal L38e protein-like8053570 3002206 SCOP2B (2022-06-29)
WA [auth Ae]SCOP2 Familyribosomal protein l39e8097351 4001518 SCOP2 (2022-06-29)
WA [auth Ae]SCOP2 SuperfamilyRibosomal protein L39e8097352 3001756 SCOP2 (2022-06-29)
XA [auth Af]SCOP2 FamilyRibosomal protein L40e8101706 4002847 SCOP2 (2022-06-29)
XA [auth Af]SCOP2 SuperfamilyZn-binding ribosomal proteins8101707 3001320 SCOP2 (2022-06-29)
YA [auth AP]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082473 3000210 SCOP2B (2022-06-29)
ZA [auth Ah]SCOP2 FamilyRibosomal protein L37ae8098253 4003704 SCOP2 (2022-06-29)
ZA [auth Ah]SCOP2 SuperfamilyZn-binding ribosomal proteins8098254 3001320 SCOP2 (2022-06-29)
FB [auth AM]SCOP2B Superfamily50S Ribosomal protein L14-like8072060 3000433 SCOP2B (2022-06-29)
GB [auth AS]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095974 3001045 SCOP2B (2022-06-29)
F [auth I]SCOP2B SuperfamilyRibosomal protein S78066011 3000799 SCOP2B (2022-06-29)
HB [auth AO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077125 3001045 SCOP2B (2022-06-29)
IB [auth AQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e8100158 3000884 SCOP2B (2022-06-29)
JB [auth AR]SCOP2B SuperfamilyTranslational machinery components8052890 3000571 SCOP2B (2022-06-29)
KB [auth AW]SCOP2B SuperfamilyRibosomal protein L228076716 3001078 SCOP2B (2022-06-29)
LB [auth AY]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095963 3000210 SCOP2B (2022-06-29)
NB [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076764 3000334 SCOP2B (2022-06-29)
PB [auth A5]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052932 3001378 SCOP2B (2022-06-29)
PB [auth A5]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052931 3002152 SCOP2B (2022-06-29)
G [auth K]SCOP2B SuperfamilyRibosomal protein S88081977 3000709 SCOP2B (2022-06-29)
RB [auth AE]SCOP2B SuperfamilyTranslational proteins8078355 3000811 SCOP2B (2022-06-29)
SB [auth AF]SCOP2B SuperfamilyRibosomal protein L48052823 3001146 SCOP2B (2022-06-29)
SB [auth AF]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052822 3002143 SCOP2B (2022-06-29)
YB [auth AX]SCOP2B Superfamily60S Ribosomal protein L22e8053062 3002158 SCOP2B (2022-06-29)
H [auth M]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082679 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth R]PF01248e3jbpR1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
K [auth O]PF03501e3jbpO1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
L [auth Y]PF01090e3jbpY1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
M [auth Z]PF01249e3jbpZ1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
N [auth 1]PF01282e3jbp11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
O [auth 2]PF03297e3jbp21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
P [auth 3]PF01283e3jbp31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
Q [auth 4]PF01667e3jbp41 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
R [auth 5]PF01200e3jbp51 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
S [auth 6]PF04758e3jbp61 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
T [auth B]PF01015e3jbpB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
T [auth B]PF01015e3jbpB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
U [auth F]PF00900e3jbpF3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
U [auth F]PF00467,PF16121e3jbpF2 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
U [auth F]PF00900,PF08071e3jbpF1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF08071ECOD (1.6)
V [auth H]PF01092e3jbpH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
W [auth J]PF01251e3jbpJ2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
X [auth L]PF01201e3jbpL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
Y [auth N]PF00338e3jbpN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
Z [auth P]PF00411e3jbpP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
AA [auth Q]PF00164e3jbpQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
BA [auth S]PF00416e3jbpS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
CA [auth T]PF00253e3jbpT1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
C [auth D]PF00189e3jbpD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
C [auth D]F_UNCLASSIFIEDe3jbpD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: F_UNCLASSIFIEDECOD (1.6)
DA [auth U]PF08069e3jbpU2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
DA [auth U]PF00312e3jbpU1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
EA [auth V]PF00366,PF16205e3jbpV1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
FA [auth X]PF00203e3jbpX1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
GA [auth C]PF00318e3jbpC1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
KA [auth AL]PF01294e3jbpAL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
LA [auth A1]PF01777e3jbpA11 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
MA [auth A2]PF01778e3jbpA21 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
D [auth E]PF00163,PF01479e3jbpE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
NA [auth A4]PF01779e3jbpA41 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
OA [auth A6]PF01248e3jbpA61 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
PA [auth A7]PF01198e3jbpA71 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
QA [auth AN]PF01929e3jbpAN1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01929ECOD (1.6)
RA [auth A8]PF01655e3jbpA81 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
SA [auth A9]PF01247e3jbpA91 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
TA [auth Aa]PF01199e3jbpAa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
UA [auth Ab]PF01158e3jbpAb1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
VA [auth Ad]PF01781e3jbpAd1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
WA [auth Ae]PF00832e3jbpAe1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
E [auth G]PF03719e3jbpG3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
E [auth G]PF00333e3jbpG4 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
E [auth G]PF00333e3jbpG1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
XA [auth Af]PF01020e3jbpAf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
YA [auth AP]PF00827e3jbpAP1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
ZA [auth Ah]PF01780e3jbpAh1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
AB [auth Ai]PF00935e3jbpAi1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
BB [auth AI]PF01159e3jbpAI1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
CB [auth AJ]PF01248e3jbpAJ1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
DB [auth Ac]PF01907e3jbpAc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
EB [auth AK]PF00572e3jbpAK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
FB [auth AM]PF00238e3jbpAM1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
GB [auth AS]PF17135e3jbpAS1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
F [auth I]PF00177e3jbpI1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
HB [auth AO]PF00828e3jbpAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
IB [auth AQ]PF00252e3jbpAQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
JB [auth AR]PF17144e3jbpAR1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF17144ECOD (1.6)
KB [auth AW]PF00237e3jbpAW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
LB [auth AY]PF00276e3jbpAY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
MB [auth AT]PF01280e3jbpAT1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
MB [auth AT]PF01280e3jbpAT2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
NB [auth AZ]PF16906e3jbpAZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
OB [auth A3]PF00831e3jbpA31 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
PB [auth A5]PF00327,PF08079e3jbpA51 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
QB [auth AD]PF00181e3jbpAD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
QB [auth AD]PF03947e3jbpAD2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
G [auth K]PF00410e3jbpK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
G [auth K]PF00410e3jbpK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
RB [auth AE]PF00297e3jbpAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
TB [auth AG]PF00281,PF00673e3jbpAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
UB [auth AU]F_UNCLASSIFIEDe3jbpAU2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
UB [auth AU]PF01775e3jbpAU1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
VB [auth AH]PF00347e3jbpAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
WB [auth AV]PF01157e3jbpAV1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
XB [auth Ag]PF05162e3jbpAg1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
YB [auth AX]PF01776e3jbpAX1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
ZB [auth A0]PF01246e3jbpA01 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
H [auth M]PF00380e3jbpM1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
I [auth W]PF00833e3jbpW1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth R]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth O]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
L [auth Y]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
M [auth Z]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
N [auth 1]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
O [auth 2]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
P [auth 3]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
Q [auth 4]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
R [auth 5]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
S [auth 6]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
T [auth B]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
U [auth F]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
U [auth F]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
U [auth F]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
U [auth F]PF00467KOW motif (KOW)KOW motif- Family
V [auth H]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
W [auth J]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
X [auth L]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
Y [auth N]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
AA [auth Q]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
BA [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
CA [auth T]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
C [auth D]PF07650KH domain (KH_2)KH domain- Domain
C [auth D]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
DA [auth U]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
DA [auth U]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
EA [auth V]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
EA [auth V]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
FA [auth X]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
GA [auth C]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KA [auth AL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
LA [auth A1]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
MA [auth A2]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
D [auth E]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth E]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth A4]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
OA [auth A6]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PA [auth A7]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
QA [auth AN]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
RA [auth A8]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
SA [auth A9]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
TA [auth Aa]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
UA [auth Ab]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
VA [auth Ad]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
WA [auth Ae]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
E [auth G]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth G]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
XA [auth Af]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
YA [auth AP]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
ZA [auth Ah]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
AB [auth Ai]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
DB [auth Ac]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
EB [auth AK]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
FB [auth AM]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
GB [auth AS]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
F [auth I]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
HB [auth AO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
IB [auth AQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
JB [auth AR]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
JB [auth AR]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
KB [auth AW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
LB [auth AY]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
LB [auth AY]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
MB [auth AT]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
NB [auth AZ]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
NB [auth AZ]PF00467KOW motif (KOW)KOW motif- Family
OB [auth A3]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PB [auth A5]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
PB [auth A5]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
QB [auth AD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
QB [auth AD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
G [auth K]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
RB [auth AE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
SB [auth AF]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
SB [auth AF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
TB [auth AG]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
UB [auth AU]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
VB [auth AH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
WB [auth AV]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
XB [auth Ag]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
YB [auth AX]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
ZB [auth A0]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
H [auth M]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
I [auth W]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
18S ribosomal RNA---
J [auth R]40S ribosomal protein eS12
K [auth O]40S ribosomal protein eS10
L [auth Y]40S ribosomal protein eS19
M [auth Z]40S ribosomal protein eS21
N [auth 1]40S ribosomal protein eS24
O [auth 2]40S ribosomal protein eS25
P [auth 3]40S ribosomal protein eS26
Q [auth 4]40S ribosomal protein eS27
R [auth 5]40S ribosomal protein eS28
S [auth 6]40S ribosomal protein eS30
B [auth 7]E-tRNA---
T [auth B]40S ribosomal protein eS1
U [auth F]40S ribosomal protein eS4
V [auth H]40S ribosomal protein eS6
W [auth J]40S ribosomal protein eS7
X [auth L]40S ribosomal protein eS8
Y [auth N]40S ribosomal protein uS10
Z [auth P]40S ribosomal protein uS11---
AA [auth Q]40S ribosomal protein uS12
BA [auth S]40S ribosomal protein uS13
CA [auth T]40S ribosomal protein uS14
C [auth D]40S ribosomal protein uS3
DA [auth U]40S ribosomal protein uS15
EA [auth V]40S ribosomal protein uS17
FA [auth X]40S ribosomal protein uS19
GA [auth C]40S ribosomal protein uS2
HA [auth AA]28S ribosomal RNA---
IA [auth AC]5.8S ribosomal RNA---
JA [auth AB]5S ribosomal RNA---
KA [auth AL]60S ribosomal protein eL13
LA [auth A1]60S ribosomal protein eL27
MA [auth A2]60S ribosomal protein eL28- -
D [auth E]40S ribosomal protein uS4
NA [auth A4]60S ribosomal protein eL29
OA [auth A6]60S ribosomal protein eL30
PA [auth A7]60S ribosomal protein eL31
QA [auth AN]60S ribosomal protein eL14
RA [auth A8]60S ribosomal protein eL32
SA [auth A9]60S ribosomal protein eL33
TA [auth Aa]60S ribosomal protein eL34
UA [auth Ab]60S ribosomal protein eL36
VA [auth Ad]60S ribosomal protein eL38
WA [auth Ae]60S ribosomal protein eL39
E [auth G]40S ribosomal protein uS5
XA [auth Af]60S ribosomal protein eL40
YA [auth AP]60S ribosomal protein eL15
ZA [auth Ah]60S ribosomal protein eL43
AB [auth Ai]60S ribosomal protein eL44
BB [auth AI]60S ribosomal protein eL6---
CB [auth AJ]60S ribosomal protein eL8
DB [auth Ac]60S ribosomal protein eL37
EB [auth AK]60S ribosomal protein uL13
FB [auth AM]60S ribosomal protein uL14
GB [auth AS]60S ribosomal protein eL18
F [auth I]40S ribosomal protein uS7
HB [auth AO]60S ribosomal protein uL15
IB [auth AQ]60S ribosomal protein uL16
JB [auth AR]60S ribosomal protein uL18
KB [auth AW]60S ribosomal protein uL22
LB [auth AY]60S ribosomal protein uL23
MB [auth AT]60S ribosomal protein eL19
NB [auth AZ]60S ribosomal protein uL24
OB [auth A3]60S ribosomal protein uL29
PB [auth A5]60S ribosomal protein uL30
QB [auth AD]60S ribosomal protein uL2
G [auth K]40S ribosomal protein uS8
RB [auth AE]60S ribosomal protein uL3
SB [auth AF]60S ribosomal protein uL4
TB [auth AG]60S ribosomal protein uL5
UB [auth AU]60S ribosomal protein eL20
VB [auth AH]60S ribosomal protein uL6
WB [auth AV]60S ribosomal protein eL21
XB [auth Ag]60S ribosomal protein eL41
YB [auth AX]60S ribosomal protein eL22
ZB [auth A0]60S ribosomal protein eL24
H [auth M]40S ribosomal protein uS9
I [auth W]40S ribosomal protein eS17

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth R]IPR000530Small ribosomal subunit protein eS12Family
J [auth R]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth R]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth R]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
K [auth O]IPR037447Small ribosomal subunit protein eS10Family
K [auth O]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
K [auth O]IPR005326Plectin/eS10, N-terminalDomain
L [auth Y]IPR001266Small ribosomal subunit protein eS19Family
L [auth Y]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
L [auth Y]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
L [auth Y]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
M [auth Z]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
M [auth Z]IPR001931Small ribosomal subunit protein eS21Family
N [auth 1]IPR001976Small ribosomal subunit protein eS24Family
N [auth 1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
N [auth 1]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
O [auth 2]IPR004977Small ribosomal subunit protein eS25Family
P [auth 3]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
P [auth 3]IPR000892Small ribosomal subunit protein eS26Family
P [auth 3]IPR047864Ribosomal protein eS26, conserved siteConserved Site
Q [auth 4]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
Q [auth 4]IPR000592Small ribosomal subunit protein eS27Family
Q [auth 4]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth 5]IPR028626Ribosomal protein eS28 conserved siteConserved Site
R [auth 5]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
R [auth 5]IPR000289Small ribosomal subunit protein eS28Family
S [auth 6]IPR006846Small ribosomal subunit protein eS30Family
T [auth B]IPR001593Small ribosomal subunit protein eS1Family
T [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
U [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
U [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
U [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
U [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
U [auth F]IPR000876Small ribosomal subunit protein eS4Family
U [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
U [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
U [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
U [auth F]IPR005824KOWDomain
V [auth H]IPR001377Small ribosomal subunit protein eS6Family
V [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
W [auth J]IPR000554Small ribosomal subunit protein eS7Family
X [auth L]IPR001047Small ribosomal subunit protein eS8Family
X [auth L]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
X [auth L]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
Y [auth N]IPR001848Small ribosomal subunit protein uS10Family
Y [auth N]IPR027486Small ribosomal subunit protein uS10 domainDomain
Y [auth N]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
Y [auth N]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
AA [auth Q]IPR006032Small ribosomal subunit protein uS12Family
AA [auth Q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth Q]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
BA [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
BA [auth S]IPR001892Small ribosomal subunit protein uS13Family
BA [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
BA [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
CA [auth T]IPR001209Small ribosomal subunit protein uS14Family
CA [auth T]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
CA [auth T]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
CA [auth T]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
C [auth D]IPR004044K Homology domain, type 2Domain
C [auth D]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth D]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth D]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth D]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
C [auth D]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
DA [auth U]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
DA [auth U]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
DA [auth U]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
DA [auth U]IPR000589Small ribosomal subunit protein uS15Family
EA [auth V]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
EA [auth V]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EA [auth V]IPR000266Small ribosomal subunit protein uS17Family
EA [auth V]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
EA [auth V]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
FA [auth X]IPR002222Small ribosomal subunit protein uS19Family
FA [auth X]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
FA [auth X]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
FA [auth X]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
GA [auth C]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
GA [auth C]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
GA [auth C]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
GA [auth C]IPR001865Small ribosomal subunit protein uS2Family
GA [auth C]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
KA [auth AL]IPR001380Large ribosomal subunit protein eL13Family
KA [auth AL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
LA [auth A1]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
LA [auth A1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth A1]IPR001141Large ribosomal subunit protein eL27Family
LA [auth A1]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
MA [auth A2]IPR029004Ribosomal eL28/Mak16Domain
D [auth E]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth E]IPR002942RNA-binding S4 domainDomain
D [auth E]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth E]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
D [auth E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth E]IPR022801Small ribosomal subunit protein uS4Family
NA [auth A4]IPR002673Large ribosomal subunit protein eL29Family
OA [auth A6]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
OA [auth A6]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
OA [auth A6]IPR039109Large ribosomal subunit protein eL30-likeFamily
OA [auth A6]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
PA [auth A7]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
PA [auth A7]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
PA [auth A7]IPR000054Large ribosomal subunit protein eL31Family
QA [auth AN]IPR039660Large ribosomal subunit protein eL14Family
QA [auth AN]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
QA [auth AN]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth AN]IPR002784Large ribosomal subunit protein eL14 domainDomain
QA [auth AN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth A8]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
RA [auth A8]IPR001515Large ribosomal subunit protein eL32Family
RA [auth A8]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
SA [auth A9]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
SA [auth A9]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SA [auth A9]IPR001780Large ribosomal subunit protein eL33Family
TA [auth Aa]IPR008195Large ribosomal subunit protein eL34Family
TA [auth Aa]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
UA [auth Ab]IPR000509Large ribosomal subunit protein eL36Family
UA [auth Ab]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
VA [auth Ad]IPR002675Large ribosomal subunit protein eL38Family
VA [auth Ad]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
WA [auth Ae]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
WA [auth Ae]IPR000077Large ribosomal subunit protein eL39Family
WA [auth Ae]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
E [auth G]IPR000851Small ribosomal subunit protein uS5Family
E [auth G]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
E [auth G]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth G]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth G]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth G]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
XA [auth Af]IPR019954Ubiquitin conserved siteConserved Site
XA [auth Af]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
XA [auth Af]IPR000626Ubiquitin-like domainDomain
XA [auth Af]IPR019956Ubiquitin domainDomain
XA [auth Af]IPR001975Large ribosomal subunit protein eL40 domainDomain
XA [auth Af]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
XA [auth Af]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YA [auth AP]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
YA [auth AP]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
YA [auth AP]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
YA [auth AP]IPR000439Large ribosomal subunit protein eL15Family
ZA [auth Ah]IPR002674Large ribosomal subunit protein eL43Family
ZA [auth Ah]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZA [auth Ah]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
AB [auth Ai]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth Ai]IPR000552Large ribosomal subunit protein eL42Family
CB [auth AJ]IPR001921Large ribosomal subunit protein eL8Family
CB [auth AJ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
CB [auth AJ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CB [auth AJ]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
DB [auth Ac]IPR001569Large ribosomal subunit protein eL37Family
DB [auth Ac]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
DB [auth Ac]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DB [auth Ac]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EB [auth AK]IPR005822Large ribosomal subunit protein uL13Family
EB [auth AK]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
EB [auth AK]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
FB [auth AM]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FB [auth AM]IPR000218Large ribosomal subunit protein uL14Family
GB [auth AS]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GB [auth AS]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
GB [auth AS]IPR000039Large ribosomal subunit protein eL18Family
GB [auth AS]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
F [auth I]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
F [auth I]IPR000235Small ribosomal subunit protein uS7Family
F [auth I]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
F [auth I]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth I]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
HB [auth AO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
HB [auth AO]IPR030878Large ribosomal subunit protein uL15Family
HB [auth AO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
HB [auth AO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IB [auth AQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IB [auth AQ]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
IB [auth AQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
IB [auth AQ]IPR047873Large ribosomal subunit protein uL16Family
IB [auth AQ]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
JB [auth AR]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
JB [auth AR]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
KB [auth AW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
KB [auth AW]IPR001063Large ribosomal subunit protein uL22Family
KB [auth AW]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
LB [auth AY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LB [auth AY]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LB [auth AY]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
LB [auth AY]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
LB [auth AY]IPR013025Large ribosomal subunit protein uL23-likeFamily
MB [auth AT]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
MB [auth AT]IPR039547Large ribosomal subunit protein eL19Family
MB [auth AT]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
MB [auth AT]IPR000196Large ribosomal subunit protein eL19 domainDomain
MB [auth AT]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
NB [auth AZ]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
NB [auth AZ]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NB [auth AZ]IPR005824KOWDomain
NB [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NB [auth AZ]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
OB [auth A3]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
OB [auth A3]IPR001854Large ribosomal subunit protein uL29Family
OB [auth A3]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
PB [auth A5]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
PB [auth A5]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
PB [auth A5]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
PB [auth A5]IPR039699Large ribosomal subunit protein uL30Family
PB [auth A5]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
PB [auth A5]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
QB [auth AD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
QB [auth AD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QB [auth AD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QB [auth AD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
QB [auth AD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
QB [auth AD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
QB [auth AD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
QB [auth AD]IPR002171Large ribosomal subunit protein uL2Family
G [auth K]IPR000630Small ribosomal subunit protein uS8Family
G [auth K]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
G [auth K]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RB [auth AE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
RB [auth AE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
RB [auth AE]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
RB [auth AE]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
RB [auth AE]IPR000597Large ribosomal subunit protein uL3Family
SB [auth AF]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
SB [auth AF]IPR002136Large ribosomal subunit protein uL4Family
SB [auth AF]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
SB [auth AF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
TB [auth AG]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
TB [auth AG]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
TB [auth AG]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
TB [auth AG]IPR002132Large ribosomal subunit protein uL5Family
UB [auth AU]IPR028877Large ribosomal subunit protein eL20Family
UB [auth AU]IPR023573Large ribosomal subunit protein eL20 domainDomain
UB [auth AU]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
VB [auth AH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
VB [auth AH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
VB [auth AH]IPR000702Large ribosomal subunit protein uL6-likeFamily
WB [auth AV]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
WB [auth AV]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
WB [auth AV]IPR001147Large ribosomal subunit protein eL21Family
WB [auth AV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XB [auth Ag]IPR007836Large ribosomal subunit protein eS32Family
YB [auth AX]IPR002671Large ribosomal subunit protein eL22Family
YB [auth AX]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
ZB [auth A0]IPR000988Large ribosomal subunit protein eL24-relatedFamily
ZB [auth A0]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
H [auth M]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
H [auth M]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth M]IPR000754Small ribosomal subunit protein uS9Family
H [auth M]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
I [auth W]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
I [auth W]IPR001210Small ribosomal subunit protein eS17Family
I [auth W]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site