3JB7
In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | F_UNCLASSIFIED | e3jb7B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e3jb7B2 | A: mixed a+b and a/b | X: Viral structural protein 4 N-terminal domain (From Topology) | H: Viral structural protein 4 N-terminal domain (From Topology) | T: Viral structural protein 4 N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e3jb7A1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF22213 | e3jb7A3 | A: alpha complex topology | X: C-terminal additional helical subdomain in reovirus polymerase lambda3 (From Topology) | H: C-terminal additional helical subdomain in reovirus polymerase lambda3 (From Topology) | T: C-terminal additional helical subdomain in reovirus polymerase lambda3 | F: PF22213 | ECOD (1.6) |
A | PF22209 | e3jb7A4 | A: alpha complex topology | X: N-terminal additional helical subdomain in reovirus polymerase lambda3 (From Homology) | H: N-terminal additional helical subdomain in reovirus polymerase lambda3 | T: N-terminal additional helical subdomain in reovirus polymerase lambda3 | F: PF22209 | ECOD (1.6) |
A | PF22212 | e3jb7A2 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF22212 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Viral structural protein 4 | - | - | - | |
C, F [auth D] | VP1 CSP | - | - | - |
D [auth t] | RNA (5'-R(P*GP*GP*GP*GP*GP*G)-3') | - | - | - |
E [auth m] | RNA (5'-R(P*CP*CP*CP*CP*C)-3') | - | - | - |
CPV RNA-dependent RNA polymerase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C, F [auth D] | IPR049421 | Capsid protein VP1, small protrusion domain | Domain |
C, F [auth D] | IPR049422 | Capsid protein VP1/VP3, C-terminal | Domain |
IPR007097 | RNA-directed RNA polymerase, reovirus | Domain |