3J9T | pdb_00003j9t

Yeast V-ATPase state 1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L [auth P]	d3j9tp_	All alpha proteins	alpha-alpha superhelix	ARM repeat	Regulatory subunit H of the V-type ATPase	Regulatory subunit H of the V-type ATPase	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
R [auth I]	d3j9ti1	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	V-type ATPase subunit E-like	V-type ATPase subunit E C-terminal domain	V-type ATPase subunit E C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
R [auth I]	d3j9ti2	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
P [auth G]	d3j9tg1	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	V-type ATPase subunit E-like	V-type ATPase subunit E C-terminal domain	V-type ATPase subunit E C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
P [auth G]	d3j9tg2	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
K	d3j9tk1	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	V-type ATPase subunit E-like	V-type ATPase subunit E C-terminal domain	V-type ATPase subunit E C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
K	d3j9tk2	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	V-type ATPase peripheral stalk subunit E coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
Q [auth J]	d3j9tj_	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
O [auth H]	d3j9th_	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
J [auth L]	d3j9tl_	Coiled coil proteins	Parallel coiled-coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	V-type ATPase peripheral stalk subunit G coiled coil	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
I [auth Q]	d3j9tq_	Membrane and cell surface proteins and peptides	V-type ATP synthase subunit C	V-type ATP synthase subunit C	V-type ATP synthase subunit C	V-type proton ATPase subunit d	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
H [auth F]	d3j9tf3	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase B subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
H [auth F]	d3j9tf1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase B subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
H [auth F]	d3j9tf2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase B subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
F [auth D]	d3j9td3	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase B subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
F [auth D]	d3j9td1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase B subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
F [auth D]	d3j9td2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase B subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
D [auth B]	d3j9tb3	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase B subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
D [auth B]	d3j9tb1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase B subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
D [auth B]	d3j9tb2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase B subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
G [auth E]	d3j9te4	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase A subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
G [auth E]	d3j9te1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase A subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
G [auth E]	d3j9te3	All beta proteins	Barrel-sandwich hybrid	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
G [auth E]	d3j9te2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase A subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
E [auth C]	d3j9tc4	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase A subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
E [auth C]	d3j9tc1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase A subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
E [auth C]	d3j9tc3	All beta proteins	Barrel-sandwich hybrid	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
E [auth C]	d3j9tc2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase A subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
C [auth A]	d3j9ta4	All alpha proteins	Left-handed superhelix	C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	C-terminal domain of A and B subunits of V1 ATP synthase and A1 ATP sythase	V1 ATP synthase A subunit, C-terminal domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
C [auth A]	d3j9ta1	All beta proteins	Domain of alpha and beta subunits of F1 ATP synthase-like	N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases	N-terminal domain of A and B subunits of V1 ATP synthase	V1 ATP synthase A subunit, domain 1	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
C [auth A]	d3j9ta3	All beta proteins	Barrel-sandwich hybrid	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain-like	V1 ATP synthase A subunit, bulge domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
C [auth A]	d3j9ta2	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	RecA protein-like (ATPase-domain)	V1 ATP synthase A subunit, central domain	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
B [auth N]	d3j9tn_	Alpha and beta proteins (a/b)	AtpF-like	AtpF-like	AtpF-like	V-type ATP synthase subunit F, AtpF	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
Z [auth X]	d3j9tx1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
Y [auth S]	d3j9ts1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
X [auth W]	d3j9tw1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
W [auth T]	d3j9tt1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
V	d3j9tv1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
U	d3j9tu1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
T [auth R]	d3j9tr1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
S [auth Y]	d3j9ty1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
AA [auth Z]	d3j9tz1	Membrane and cell surface proteins and peptides	Transmembrane helix hairpin	Rotary ATPase ring subunits	F1F0 ATP synthase subunit C or V-type proton ATPase subunit c	V-type proton ATPase subunit c	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
N [auth O]	d3j9to_	Multi-domain proteins (alpha and beta)	Vacuolar ATP synthase subunit C	Vacuolar ATP synthase subunit C	Vacuolar ATP synthase subunit C	Vacuolar ATP synthase subunit C	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)
A [auth M]	d3j9tm_	Coiled coil proteins	Antiparallel coiled-coil	V-type ATPase central rotor subunit D	V1 ATP synthase D subunit	V1 ATP synthase D subunit	(Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L [auth P]	SCOP2B Superfamily	ARM repeat-like	8033221	3000116	SCOP2B (2022-06-29)
N [auth O]	SCOP2B Superfamily	Vacuolar ATP synthase subunit C	8042806	3001744	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M [auth b]	e3j9tb1	A: TBP-like	X: Bet v1-like	H: Bet v1-like	T:	F:	ECOD (20:10:01)
M [auth b]	e3j9tb2	A: TBP-like	X: Bet v1-like	H: Bet v1-like	T: V_ATPase_I	F:	ECOD (20:10:01)
L [auth P]	e3j9tP1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
R [auth I]	e3j9tI1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
P [auth G]	e3j9tG1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
K	e3j9tK1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
Q [auth J]	e3j9tJ1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
O [auth H]	e3j9tH1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
J [auth L]	e3j9tL1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
I [auth Q]	e3j9tQ1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
H [auth F]	e3j9tF1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
F [auth D]	e3j9tD1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
D [auth B]	e3j9tB1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
G [auth E]	e3j9tE1	A: Alpha helical domain of ribonucleotide reductases	X: Alpha helical domain of ribonucleotide reductases	H: Alpha helical domain of ribonucleotide reductases	T: U6-snRNA_bdg	F:	ECOD (20:10:01)
E [auth C]	e3j9tC1	A: Alpha helical domain of ribonucleotide reductases	X: Alpha helical domain of ribonucleotide reductases	H: Alpha helical domain of ribonucleotide reductases	T: U6-snRNA_bdg	F:	ECOD (20:10:01)
C [auth A]	e3j9tA1	A: Alpha helical domain of ribonucleotide reductases	X: Alpha helical domain of ribonucleotide reductases	H: Alpha helical domain of ribonucleotide reductases	T: U6-snRNA_bdg	F:	ECOD (20:10:01)
B [auth N]	e3j9tN1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
Z [auth X]	e3j9tX1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
Y [auth S]	e3j9tS1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
X [auth W]	e3j9tW1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
W [auth T]	e3j9tT1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
V	e3j9tV1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
U	e3j9tU1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
T [auth R]	e3j9tR1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
S [auth Y]	e3j9tY1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
BA [auth a]	e3j9ta1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
AA [auth Z]	e3j9tZ1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)
N [auth O]	e3j9tO1	A: Carbon-nitrogen hydrolase-like	X: Metallo-dependent phosphatases	H: Metallo-dependent phosphatases	T: Lactamase_B_2	F:	ECOD (20:10:01)
A [auth M]	e3j9tM1	A: beta-propeller-like	X: beta-propeller	H: PERK and Ire1 luminal domains	T:	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
L [auth P]	PF11698	V-ATPase subunit H (V-ATPase_H_C)	V-ATPase subunit H	-	Repeat
L [auth P]	PF03224	V-ATPase subunit H (V-ATPase_H_N)	V-ATPase subunit H	-	Repeat
K, P [auth G], R [auth I]	PF01991	ATP synthase (E/31 kDa) subunit (vATP-synt_E)	ATP synthase (E/31 kDa) subunit	-	Family
J [auth L], O [auth H], Q [auth J]	PF03179	Vacuolar (H+)-ATPase G subunit (V-ATPase_G)	Vacuolar (H+)-ATPase G subunit	-	Coiled-coil
I [auth Q]	PF01992	ATP synthase (C/AC39) subunit (vATP-synt_AC39)	ATP synthase (C/AC39) subunit	-	Family
D [auth B], F [auth D], H [auth F]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
D [auth B], F [auth D], H [auth F]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
D [auth B], F [auth D], H [auth F]	PF01496	V-type ATPase 116kDa subunit family (V_ATPase_I)	V-type ATPase 116kDa subunit family	-	Family
D [auth B], F [auth D], H [auth F]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
C [auth A], E [auth C], G [auth E]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
C [auth A], E [auth C], G [auth E]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
C [auth A], E [auth C], G [auth E]	PF16886	ATPsynthase alpha/beta subunit barrel-sandwich domain (ATP-synt_ab_Xtn)	ATPsynthase alpha/beta subunit barrel-sandwich domain	This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel ...	This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel-sandwich domain the C-terminal strand is circularly permuted and occupies the spatial position of the N-terminal strand in other hybrid domains.	Domain
C [auth A], E [auth C], G [auth E]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
C [auth A], E [auth C], G [auth E]	PF00137	ATP synthase subunit C (ATP-synt_C)	ATP synthase subunit C	This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].	Domain
B [auth N]	PF01990	ATP synthase (F/14-kDa) subunit (ATP-synt_F)	ATP synthase (F/14-kDa) subunit	-	Family
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	PF00137	ATP synthase subunit C (ATP-synt_C)	ATP synthase subunit C	This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].	Domain
N [auth O]	PF03223	V-ATPase subunit C (V-ATPase_C)	V-ATPase subunit C	-	Family
A [auth M]	PF01813	ATP synthase subunit D (ATP-synt_D)	ATP synthase subunit D	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
M [auth b]	V-type proton ATPase subunit a, vacuolar isoform	phosphatidylinositol-3,5-bisphosphate binding ion binding binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity phosphatidylinositol-3,5-bisphosphate binding ion binding binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity ATPase binding protein binding enzyme binding	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis protein localization to vacuolar membrane cellular localization macromolecule localization protein localization to organelle protein localization to vacuole intracellular protein localization localization within membrane protein localization to membrane cellular response to stimulus response to stimulus response to pH cellular response to pH response to alkaline pH response to abiotic stimulus cellular response to alkaline pH cellular response to abiotic stimulus cellular response to environmental stimulus response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to chemical stimulus hyperosmotic response cellular hyperosmotic response cellular response to stress response to stress response to chemical oxoacid metabolic process metabolic process small molecule metabolic process organic acid metabolic process phosphorus metabolic process polyphosphate metabolic process homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vacuolar acidification cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis	membrane-bounded organelle storage vacuole intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle cellular anatomical structure organelle cytoplasm vacuolar membrane membrane lytic vacuole membrane membrane-bounded organelle storage vacuole intracellular anatomical structure lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle cellular anatomical structure organelle cytoplasm vacuolar membrane membrane lytic vacuole membrane bounding membrane of organelle organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex vacuolar proton-transporting V-type ATPase, V0 domain membrane protein complex proton-transporting V-type ATPase complex transporter complex proton-transporting two-sector ATPase complex proton-transporting V-type ATPase, V0 domain catalytic complex proton-transporting two-sector ATPase complex, proton-transporting domain vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex membrane microdomain membrane raft
L [auth P]	V-type proton ATPase subunit H	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system
K, P [auth G], R [auth I]	V-type proton ATPase subunit E	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system membrane microdomain membrane raft
J [auth L], O [auth H], Q [auth J]	V-type proton ATPase subunit G	pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization regulation of cellular pH intracellular monoatomic ion homeostasis Golgi lumen acidification vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex transporter complex proton-transporting two-sector ATPase complex catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex proton-transporting V-type ATPase, V1 domain vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex, catalytic domain Golgi membrane Golgi apparatus endomembrane system
I [auth Q]	V-type proton ATPase subunit d	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization cellular localization establishment of localization in cell vacuolar transport intracellular transport monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization cellular localization establishment of localization in cell vacuolar transport intracellular transport homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex catalytic complex membrane protein complex proton-transporting V-type ATPase complex transporter complex cation-transporting ATPase complex proton-transporting two-sector ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system vacuolar proton-transporting V-type ATPase, V0 domain proton-transporting V-type ATPase, V0 domain proton-transporting two-sector ATPase complex, proton-transporting domain vacuolar proton-transporting V-type ATPase complex
D [auth B], F [auth D], H [auth F]	V-type proton ATPase subunit B	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process carbohydrate derivative metabolic process primary metabolic process nucleotide metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process ribonucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process metabolic process small molecule metabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process phosphorus metabolic process homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization regulation of cellular pH intracellular monoatomic ion homeostasis inorganic ion homeostasis intracellular calcium ion homeostasis calcium ion homeostasis autophagy of peroxisome catabolic process macroautophagy pexophagy autophagy process utilizing autophagic mechanism cellular component biogenesis cellular component assembly organelle assembly membraneless organelle assembly proteasome storage granule assembly Golgi lumen acidification vacuolar acidification	organelle membrane contact site vacuole-mitochondrion membrane contact site cellular anatomical structure organelle intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule ATPase dependent transmembrane transport complex organelle membrane contact site vacuole-mitochondrion membrane contact site cellular anatomical structure organelle intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain bounding membrane of organelle proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain vacuolar membrane catalytic complex membrane vacuole intracellular membrane-bounded organelle vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex organelle membrane membrane microdomain membrane raft storage vacuole lytic vacuole fungal-type vacuole lytic vacuole membrane fungal-type vacuole membrane Golgi membrane Golgi apparatus endomembrane system
C [auth A], E [auth C], G [auth E]	V-type proton ATPase catalytic subunit A	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity hydrolase activity catalytic activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding RNA binding mRNA binding endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process carbohydrate derivative metabolic process primary metabolic process nucleotide metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process ribonucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process metabolic process small molecule metabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process phosphorus metabolic process DNA recombination DNA metabolic process macromolecule metabolic process nucleic acid metabolic process intron homing homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization regulation of cellular pH intracellular monoatomic ion homeostasis intein-mediated protein splicing gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis protein processing protein metabolic process protein splicing Golgi lumen acidification vacuolar acidification	ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain intracellular organelle cellular anatomical structure bounding membrane of organelle proton-transporting two-sector ATPase complex ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain intracellular organelle cellular anatomical structure bounding membrane of organelle proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain vacuolar membrane catalytic complex membrane vacuole intracellular membrane-bounded organelle vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex organelle cytoplasm organelle membrane storage vacuole lytic vacuole fungal-type vacuole lytic vacuole membrane fungal-type vacuole membrane Golgi membrane Golgi apparatus endomembrane system
B [auth N]	V-type proton ATPase subunit F	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	V-type proton ATPase subunit c	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis monoatomic cation transmembrane transport transmembrane transport localization transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization establishment of protein localization cellular localization protein targeting establishment of protein localization to vacuole intracellular transport protein localization to vacuole establishment of protein localization to organelle protein transport establishment of localization in cell protein localization to organelle macromolecule localization vacuolar transport intracellular protein localization protein targeting to vacuole intracellular protein transport intracellular copper ion homeostasis copper ion homeostasis import into cell endocytosis vesicle-mediated transport biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH regulation of pH regulation of biological quality regulation of cellular pH vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuole organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex catalytic complex membrane protein complex proton-transporting V-type ATPase complex transporter complex cation-transporting ATPase complex proton-transporting two-sector ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system vacuolar proton-transporting V-type ATPase, V0 domain proton-transporting V-type ATPase, V0 domain proton-transporting two-sector ATPase complex, proton-transporting domain vacuolar proton-transporting V-type ATPase complex
N [auth O]	V-type proton ATPase subunit C	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis regulation of cellular pH intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system
A [auth M]	V-type proton ATPase subunit D	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization regulation of cellular pH intracellular monoatomic ion homeostasis Golgi lumen acidification vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex transporter complex proton-transporting two-sector ATPase complex catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex membrane microdomain membrane raft proton-transporting V-type ATPase, V1 domain vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex, catalytic domain Golgi membrane Golgi apparatus endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
M [auth b]	IPR026028	ATPase, V0 complex, subunit 116kDa, eukaryotic	Family
M [auth b]	IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	Family
L [auth P]	IPR004908	ATPase, V1 complex, subunit H	Family
L [auth P]	IPR016024	Armadillo-type fold	Homologous Superfamily
L [auth P]	IPR011989	Armadillo-like helical	Homologous Superfamily
L [auth P]	IPR038497	ATPase, V1 complex, subunit H, C-terminal domain superfamily	Homologous Superfamily
L [auth P]	IPR011987	ATPase, V1 complex, subunit H, C-terminal	Domain
K, P [auth G], R [auth I]	IPR038495	V-type ATPase subunit E, C-terminal domain superfamily	Homologous Superfamily
K, P [auth G], R [auth I]	IPR002842	V-type ATPase subunit E	Family
J [auth L], O [auth H], Q [auth J]	IPR005124	Vacuolar (H+)-ATPase G subunit	Family
I [auth Q]	IPR044911	V-type ATP synthase C/D subunit, domain 3 superfamily	Homologous Superfamily
I [auth Q]	IPR002843	ATPase, V0 complex, C/D subunit	Family
I [auth Q]	IPR036079	V-type ATP synthase subunit C/D subunit superfamily	Homologous Superfamily
I [auth Q]	IPR035067	V-type ATPase subunit C/D	Homologous Superfamily
I [auth Q]	IPR016727	ATPase, V0 complex, subunit D	Family
D [auth B], F [auth D], H [auth F]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
D [auth B], F [auth D], H [auth F]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
D [auth B], F [auth D], H [auth F]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
D [auth B], F [auth D], H [auth F]	IPR005723	ATPase, V1 complex, subunit B	Family
D [auth B], F [auth D], H [auth F]	IPR022879	V-type ATP synthase regulatory subunit B/beta	Family
D [auth B], F [auth D], H [auth F]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
D [auth B], F [auth D], H [auth F]	IPR055190	ATP synthase A/B type, C-terminal domain	Domain
C [auth A], E [auth C], G [auth E]	IPR036844	Hint domain superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR022878	V-type ATP synthase catalytic alpha chain	Family
C [auth A], E [auth C], G [auth E]	IPR006142	Intein	Domain
C [auth A], E [auth C], G [auth E]	IPR007868	Hom-end-associated Hint	Domain
C [auth A], E [auth C], G [auth E]	IPR004042	Intein DOD homing endonuclease, central region	Domain
C [auth A], E [auth C], G [auth E]	IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR031686	ATPsynthase alpha/beta subunit, barrel-sandwich domain	Domain
C [auth A], E [auth C], G [auth E]	IPR006141	Intein N-terminal splicing region	PTM
C [auth A], E [auth C], G [auth E]	IPR003586	Hint domain C-terminal	Domain
C [auth A], E [auth C], G [auth E]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
C [auth A], E [auth C], G [auth E]	IPR030934	Intein C-terminal splicing region	Conserved Site
C [auth A], E [auth C], G [auth E]	IPR027434	Homing endonuclease	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
C [auth A], E [auth C], G [auth E]	IPR055190	ATP synthase A/B type, C-terminal domain	Domain
C [auth A], E [auth C], G [auth E]	IPR003587	Hint domain N-terminal	Domain
C [auth A], E [auth C], G [auth E]	IPR007869	Homing endonuclease PI-Sce	Domain
B [auth N]	IPR036906	ATPase, V1 complex, subunit F superfamily	Homologous Superfamily
B [auth N]	IPR005772	ATPase, V1 complex, subunit F, eukaryotic	Family
B [auth N]	IPR008218	ATPase, V1 complex, subunit F	Family
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	IPR035921	F/V-ATP synthase subunit C superfamily	Homologous Superfamily
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	IPR002379	V-ATPase proteolipid subunit C-like domain	Domain
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	IPR011555	V-ATPase proteolipid subunit C, eukaryotic	Family
AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, AA [auth Z], BA [auth a], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	IPR000245	V-ATPase proteolipid subunit	Family
N [auth O]	IPR036132	Vacuolar ATP synthase subunit C superfamily	Homologous Superfamily
N [auth O]	IPR004907	ATPase, V1 complex, subunit C	Family
A [auth M]	IPR002699	ATPase, V1 complex, subunit D	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A] A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth Q], J [auth L], K, L [auth P], M [auth b], N [auth O], O [auth H], P [auth G], Q [auth J], R [auth I], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	OPM	Transmembrane	Alpha-helical polytopic	Proton or Sodium translocating F-type, V-type and A-type ATPases	V-type and F-type ATPases

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A] A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth Q], J [auth L], K, L [auth P], M [auth b], N [auth O], O [auth H], P [auth G], Q [auth J], R [auth I], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A] A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth Q], J [auth L], K, L [auth P], M [auth b], N [auth O], O [auth H], P [auth G], Q [auth J], R [auth I], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A] A [auth M], AA [auth Z], B [auth N], BA [auth a], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth Q], J [auth L], K, L [auth P], M [auth b], N [auth O], O [auth H], P [auth G], Q [auth J], R [auth I], S [auth Y], T [auth R], U, V, W [auth T], X [auth W], Y [auth S], Z [auth X]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Vacuolar ATPase (V-ATPase)	Complete V-ATPase by cryo-EM, state 1