3J9O | pdb_00003j9o

CryoEM structure of a type VI secretion system


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Le3j9oL1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF:ECOD (v294.1)
Je3j9oJ1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF:ECOD (v294.1)
He3j9oH1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF:ECOD (v294.1)
FSBP_bac_1e3j9oF1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF: SBP_bac_1ECOD (v294.1)
DSLTe3j9oD1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Protease propeptides/inhibitorsT: Protease propeptides/inhibitorsF: SLTECOD (v294.1)
BRv2632c-likee3j9oB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: DHS-like NAD/FAD-binding domainF: Rv2632c-likeECOD (v294.1)
KMG1e3j9oK1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
IMG1e3j9oI1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
GMG1e3j9oG1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
EMG1e3j9oE1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
CNup160e3j9oC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Fibronectin type I module-likeT: Fibronectin type I moduleF: Nup160ECOD (v294.1)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, D, F, H, J
IPR010269Type VI secretion system TssC-likeFamily
B, D, F, H, J
IPR044032TssC1, C-terminalDomain
B, D, F, H, J
IPR044031TssC1, N-terminalDomain
A, C, E, G, I
IPR008312Type VI secretion system sheath protein TssB1Family