3J9L

Structure of Dark apoptosome from Drosophila melanogaster


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF22164e3j9lA4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
APF22080e3j9lA3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
AF_UNCLASSIFIEDe3j9lA5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
APF17908e3j9lA2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
APF00931e3j9lA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
B [auth C]PF22164e3j9lC4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
B [auth C]PF22080e3j9lC3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
B [auth C]F_UNCLASSIFIEDe3j9lC5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
B [auth C]PF17908e3j9lC2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
B [auth C]PF00931e3j9lC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
C [auth D]PF22164e3j9lD4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
C [auth D]PF22080e3j9lD3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
C [auth D]F_UNCLASSIFIEDe3j9lD5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
C [auth D]PF17908e3j9lD2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
C [auth D]PF00931e3j9lD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
D [auth E]PF22164e3j9lE4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
D [auth E]PF22080e3j9lE3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
D [auth E]F_UNCLASSIFIEDe3j9lE5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
D [auth E]PF17908e3j9lE2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
D [auth E]PF00931e3j9lE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
E [auth F]PF22164e3j9lF4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
E [auth F]PF22080e3j9lF3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
E [auth F]F_UNCLASSIFIEDe3j9lF5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
E [auth F]PF17908e3j9lF2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
E [auth F]PF00931e3j9lF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
F [auth G]PF22164e3j9lG4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
F [auth G]PF22080e3j9lG3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
F [auth G]F_UNCLASSIFIEDe3j9lG5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
F [auth G]PF17908e3j9lG2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
F [auth G]PF00931e3j9lG1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
G [auth H]PF22164e3j9lH4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
G [auth H]PF22080e3j9lH3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
G [auth H]F_UNCLASSIFIEDe3j9lH5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
G [auth H]PF17908e3j9lH2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
G [auth H]PF00931e3j9lH1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
H [auth I]PF22164e3j9lI4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
H [auth I]PF22080e3j9lI3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
H [auth I]F_UNCLASSIFIEDe3j9lI5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
H [auth I]PF17908e3j9lI2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
H [auth I]PF00931e3j9lI1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
I [auth J]PF22164e3j9lJ4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
I [auth J]PF22080e3j9lJ3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
I [auth J]F_UNCLASSIFIEDe3j9lJ5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
I [auth J]PF17908e3j9lJ2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
I [auth J]PF00931e3j9lJ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
J [auth K]PF22164e3j9lK4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
J [auth K]PF22080e3j9lK3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
J [auth K]F_UNCLASSIFIEDe3j9lK5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
J [auth K]PF17908e3j9lK2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
J [auth K]PF00931e3j9lK1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
K [auth L]PF22164e3j9lL4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
K [auth L]PF22080e3j9lL3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
K [auth L]F_UNCLASSIFIEDe3j9lL5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
K [auth L]PF17908e3j9lL2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
K [auth L]PF00931e3j9lL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
L [auth M]PF22164e3j9lM4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
L [auth M]PF22080e3j9lM3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
L [auth M]F_UNCLASSIFIEDe3j9lM5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
L [auth M]PF17908e3j9lM2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
L [auth M]PF00931e3j9lM1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
M [auth N]PF22164e3j9lN4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
M [auth N]PF22080e3j9lN3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
M [auth N]F_UNCLASSIFIEDe3j9lN5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
M [auth N]PF17908e3j9lN2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
M [auth N]PF00931e3j9lN1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
N [auth O]PF22164e3j9lO4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
N [auth O]PF22080e3j9lO3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
N [auth O]F_UNCLASSIFIEDe3j9lO5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
N [auth O]PF17908e3j9lO2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
N [auth O]PF00931e3j9lO1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
O [auth P]PF22164e3j9lP4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
O [auth P]PF22080e3j9lP3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)
O [auth P]F_UNCLASSIFIEDe3j9lP5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
O [auth P]PF17908e3j9lP2 A: alpha superhelicesX: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)H: Apoptotic protease-activating factor 1 (Apaf-1) helical domain (From Topology)T: Apoptotic protease-activating factor 1 (Apaf-1) helical domainF: PF17908ECOD (1.6)
O [auth P]PF00931e3j9lP1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00931ECOD (1.6)
P [auth Q]PF22164e3j9lQ4 A: alpha arraysX: HTHH: HTHT: wingedF: PF22164ECOD (1.6)
P [auth Q]PF22080e3j9lQ3 A: alpha arraysX: DEATH domainH: DEATH domain (From Topology)T: DEATH domainF: PF22080ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Apaf-1 related killer DARK

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR041452APAF-1 helical domainDomain
IPR002182NB-ARCDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat