3J7Q | pdb_00003j7q

Structure of the idle mammalian ribosome-Sec61 complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth D]	SCOP2B Superfamily	Translational machinery components	8052879	3000571	SCOP2B (2022-06-29)
OA [auth m]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8101563	3001320	SCOP2B (2022-06-29)
NA [auth l]	SCOP2 Family	ribosomal protein l39e	8096889	4001518	SCOP2 (2022-06-29)
NA [auth l]	SCOP2 Superfamily	Ribosomal protein L39e	8096890	3001756	SCOP2 (2022-06-29)
NA [auth l]	SCOP2B Superfamily	Ribosomal protein L39e	8098012	3001756	SCOP2B (2022-06-29)
IA [auth g]	SCOP2B Superfamily	Ribosomal protein L34e-like	8053544	3002203	SCOP2B (2022-06-29)
GA [auth e]	SCOP2B Superfamily	Ribosomal protein L32e	8102190	3000982	SCOP2B (2022-06-29)
EA [auth c]	SCOP2 Family	L30e/L7ae ribosomal proteins	8096885	4001513	SCOP2 (2022-06-29)
EA [auth c]	SCOP2 Superfamily	L30e-like	8096886	3001739	SCOP2 (2022-06-29)
DA [auth b]	SCOP2B Superfamily	Ribosomal protein L29e	8053041	3002157	SCOP2B (2022-06-29)
CA [auth a]	SCOP2 Family	Ribosomal proteins L15p and L18e	8096879	4003555	SCOP2 (2022-06-29)
CA [auth a]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8096880	3001045	SCOP2 (2022-06-29)
BA [auth Z]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8053051	3000334	SCOP2B (2022-06-29)
AA [auth Y]	SCOP2 Family	Ribosomal proteins L24p and L21e	8096887	4001752	SCOP2 (2022-06-29)
AA [auth Y]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8096888	3000334	SCOP2 (2022-06-29)
X [auth V]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8098864	3000433	SCOP2B (2022-06-29)
W [auth U]	SCOP2B Superfamily	60S Ribosomal protein L22e	8053061	3002158	SCOP2B (2022-06-29)
S [auth Q]	SCOP2 Family	Ribosomal proteins L15p and L18e	8046506	4003555	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8095972	3001045	SCOP2 (2022-06-29)
R [auth P]	SCOP2B Superfamily	Ribosomal protein L22	8096624	3001078	SCOP2B (2022-06-29)
P [auth N]	SCOP2 Family	L15e	8096617	4000945	SCOP2 (2022-06-29)
P [auth N]	SCOP2 Superfamily	Ribosomal proteins S24e, L23 and L15e	8096618	3000210	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Family	Ribosomal protein L13e	8096881	4006241	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Superfamily	Ribosomal protein L13e-like	8096882	3002162	SCOP2 (2022-06-29)
M [auth J]	SCOP2B Superfamily	RL5-like	8073896	3001709	SCOP2B (2022-06-29)
L [auth I]	SCOP2 Family	Ribosomal protein L10e	8099255	4001135	SCOP2 (2022-06-29)
L [auth I]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8099256	3000884	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
RA [auth p]	Rhv	e3j7qp1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
I [auth F]	Rhv	e3j7qF1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
H [auth E]	Rhv	e3j7qE1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
G [auth D]	Rhv	e3j7qD1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
F [auth C]	EryCIII-like_N	e3j7qC1	A: alpha arrays	X: Rubredoxin-like	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: EryCIII-like_N	ECOD (v295)
E [auth B]	Rhv	e3j7qB1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
UA [auth 2]	Rhv	e3j7q21	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
TA [auth 1]	Rhv	e3j7q11	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
SA [auth r]	Mtrc-MtrF_II-IV_dom	e3j7qr1	A: alpha arrays	X: Alpha-beta plaits	H: Pseudouridine synthase	T: Pseudouridine synthase	F: Mtrc-MtrF_II-IV_dom	ECOD (v295)
QA [auth o]	Rhv	e3j7qo1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
PA [auth n]	Ribosomal_L32p	e3j7qn1	A: alpha arrays	X: Formyltransferase	H: Formyltransferase	T: Formyltransferase	F: Ribosomal_L32p	ECOD (v295)
OA [auth m]	Rhv	e3j7qm1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
NA [auth l]	Rhv	e3j7ql1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
D [auth A]	Rhv	e3j7qA1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
MA [auth k]	V_ATPase_I	e3j7qk1	A: alpha arrays	X: Alpha-beta plaits	H: Pseudouridine synthase	T: Pseudouridine synthase	F: V_ATPase_I	ECOD (v295)
LA [auth j]	Rhv	e3j7qj1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
KA [auth i]	KAsynt_C_assoc	e3j7qi1	A: alpha arrays	X: Type II ABC importer transmembrane domain fold	H: Type II ABC importer transmembrane domain fold	T: Type II ABC importer transmembrane domain fold	F: KAsynt_C_assoc	ECOD (v295)
JA [auth h]	Rhv	e3j7qh1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
IA [auth g]	V_ATPase_I	e3j7qg1	A: alpha arrays	X: Alpha-beta plaits	H: Pseudouridine synthase	T: Pseudouridine synthase	F: V_ATPase_I	ECOD (v295)
HA [auth f]	Rhv	e3j7qf1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
GA [auth e]	Rhv	e3j7qe1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
FA [auth d]	Rhv	e3j7qd1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
EA [auth c]	Rhv	e3j7qc1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
DA [auth b]	V_ATPase_I	e3j7qb1	A: alpha arrays	X: Alpha-beta plaits	H: Pseudouridine synthase	T: Pseudouridine synthase	F: V_ATPase_I	ECOD (v295)
CA [auth a]	Fic	e3j7qa1	A: alpha arrays	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: Fic	ECOD (v295)
BA [auth Z]	Rhv	e3j7qZ1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
AA [auth Y]	Rhv	e3j7qY1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
Z [auth X]	Rhv	e3j7qX1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
Y [auth W]	Rhv	e3j7qW1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
X [auth V]	Rhv	e3j7qV1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
W [auth U]	KAsynt_C_assoc	e3j7qU1	A: alpha arrays	X: Type II ABC importer transmembrane domain fold	H: Type II ABC importer transmembrane domain fold	T: Type II ABC importer transmembrane domain fold	F: KAsynt_C_assoc	ECOD (v295)
V [auth T]	Rhv	e3j7qT1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
U [auth S]	Rhv	e3j7qS1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
T [auth R]	Ribosomal_L19e_C	e3j7qR1	A: alpha arrays	X: Ribosomal protein L19 (L19e) C-terminal domain	H: Ribosomal protein L19 (L19e) C-terminal domain	T: Ribosomal protein L19 (L19e) C-terminal domain	F: Ribosomal_L19e_C	ECOD (v295)
S [auth Q]	Rhv	e3j7qQ1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
R [auth P]	Rhv	e3j7qP1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
Q [auth O]	Rhv	e3j7qO1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
P [auth N]	Rhv	e3j7qN1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
O [auth M]	Rhv	e3j7qM1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
N [auth L]	V_ATPase_I	e3j7qL1	A: alpha arrays	X: Alpha-beta plaits	H: Pseudouridine synthase	T: Pseudouridine synthase	F: V_ATPase_I	ECOD (v295)
M [auth J]	Rhv	e3j7qJ1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
L [auth I]	Rhv	e3j7qI1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
K [auth H]	Rhv	e3j7qH1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)
J [auth G]	Rhv	e3j7qG1	A: alpha arrays	X: Spectrin repeat-like	H: Ribosomal protein S20	T: Ribosomal protein S20	F: Rhv	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
H [auth E]	PF03868	Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)	Ribosomal protein L6, N-terminal domain		Domain
H [auth E]	PF01159	Ribosomal protein L6e (Ribosomal_L6e)	Ribosomal protein L6e	-	Family
G [auth D]	PF17144	Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)	Ribosomal large subunit proteins 60S L5, and 50S L18	-	Family
G [auth D]	PF01198	Ribosomal protein L31e (Ribosomal_L31e)	Ribosomal protein L31e	-	Family
G [auth D]	PF14204	Ribosomal L18 C-terminal region (Ribosomal_L18_c)	Ribosomal L18 C-terminal region	This domain is the C-terminal end of ribosomal L18/L5 proteins.	Domain
F [auth C]	PF14374	60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)	60S ribosomal protein L4 C-terminal domain	This family is found at the very C-terminal of 60 ribosomal L4 proteins.	Domain
F [auth C]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
E [auth B]	PF01779	Ribosomal L29e protein family (Ribosomal_L29e)	Ribosomal L29e protein family	-	Family
BA [auth Z]	PF01777	Ribosomal L27e protein family (Ribosomal_L27e)	Ribosomal L27e protein family	The N-terminal region of the eukaryotic ribosomal L27 has the KOW motif. C-terminal region is represented by this family.	Domain
BA [auth Z]	PF00467	KOW motif (KOW)	KOW motif	-	Family
Y [auth W]	PF01246	Ribosomal protein L24e (Ribosomal_L24e)	Ribosomal protein L24e		Domain
X [auth V]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
U [auth S]	PF01775	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)	Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A	This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.	Domain
R [auth P]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
Q [auth O]	PF00935	Ribosomal protein L44 (Ribosomal_L44)	Ribosomal protein L44	-	Family
P [auth N]	PF00827	Ribosomal L15 (Ribosomal_L15e)	Ribosomal L15	-	Family
O [auth M]	PF01020	Ribosomal L40e family (Ribosomal_L40e)	Ribosomal L40e family	Bovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2].	Domain
O [auth M]	PF01929	Ribosomal protein L14 (Ribosomal_L14e)	Ribosomal protein L14	-	Family
N [auth L]	PF00832	Ribosomal L39 protein (Ribosomal_L39)	Ribosomal L39 protein	-	Family
M [auth J]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
M [auth J]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
L [auth I]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
K [auth H]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
K [auth H]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
RA [auth p]	Ribosomal protein eL43	-	-	-
I [auth F]	Ribosomal protein uL30	-	-	-
H [auth E]	Ribosomal protein eL6	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle cytoplasmic ribonucleoprotein granule intracellular membraneless organelle cytoplasm supramolecular complex ribonucleoprotein granule protein-containing complex ribosomal subunit ribonucleoprotein complex ribosome intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle cytoplasmic ribonucleoprotein granule intracellular membraneless organelle cytoplasm supramolecular complex ribonucleoprotein granule protein-containing complex ribosomal subunit ribonucleoprotein complex ribosome large ribosomal subunit membrane-bounded organelle organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment bounding membrane of organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane organelle membrane endoplasmic reticulum membrane postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse cytosolic large ribosomal subunit cytosolic ribosome cytosol nucleus
G [auth D]	Ribosomal protein uL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol large ribosomal subunit
F [auth C]	Ribosomal protein uL4	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
E [auth B]	Ribosomal protein uL3	-	-	-
VA [auth 3]	Sec61 beta subunit	-	-	-
UA [auth 2]	Sec61 gamma subunit	-	-	-
TA [auth 1]	Sec61 alpha subunit	-	-	-
SA [auth r]	Ribosomal protein eL28	-	-	-
QA [auth o]	Ribosomal protein eL42	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
PA [auth n]	Ribosomal protein eL41	-	-	-
OA [auth m]	Ribosomal protein eL40	protein tag activity molecular tag activity structural molecule activity structural constituent of ribosome	catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process protein ubiquitination macromolecule modification post-translational protein modification protein modification process catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process metabolic process cellular process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal biosynthetic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol protein-containing complex ribosomal subunit ribonucleoprotein complex large ribosomal subunit intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol protein-containing complex ribosomal subunit ribonucleoprotein complex large ribosomal subunit membrane-bounded organelle organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment bounding membrane of organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane organelle membrane endoplasmic reticulum membrane nucleus
NA [auth l]	Ribosomal protein eL39	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
D [auth A]	Ribosomal protein uL2	-	-	-
MA [auth k]	Ribosomal protein eL38	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
LA [auth j]	Ribosomal protein eL37	-	-	-
KA [auth i]	Ribosomal protein eL36	-	-	-
JA [auth h]	Ribosomal protein uL29	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process ribosomal large subunit biogenesis macromolecule biosynthetic process nucleic acid metabolic process maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) biosynthetic process cellular process metabolic process macromolecule metabolic process maturation of LSU-rRNA protein metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
IA [auth g]	Ribosomal protein eL34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
HA [auth f]	Ribosomal protein eL33	-	-	-
GA [auth e]	Ribosomal protein eL32	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit synapse cell junction
FA [auth d]	Ribosomal protein eL31	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
EA [auth c]	Ribosomal protein eL30	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	-	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth b]	Ribosomal protein eL29	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
C [auth 8]	5.8S ribosomal RNA	-	-	-
CA [auth a]	Ribosomal protein uL15	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
BA [auth Z]	Ribosomal protein eL27	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process protein metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
AA [auth Y]	Ribosomal protein uL24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle cellular anatomical structure organelle membrane organelle membrane protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
Z [auth X]	Ribosomal protein uL23	-	-	-
Y [auth W]	Ribosomal protein eL24	structural molecule activity structural constituent of ribosome	-	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
X [auth V]	Ribosomal protein uL14	transcription factor binding transcription coregulator binding protein binding binding transcription coactivator binding RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding enzyme regulator activity molecular function inhibitor activity ubiquitin-protein transferase regulator activity ubiquitin-protein transferase inhibitor activity ubiquitin ligase inhibitor activity transcription factor binding transcription coregulator binding protein binding binding transcription coactivator binding RNA binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding enzyme regulator activity molecular function inhibitor activity ubiquitin-protein transferase regulator activity ubiquitin-protein transferase inhibitor activity ubiquitin ligase inhibitor activity molecular function regulator activity enzyme inhibitor activity ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding structural molecule activity structural constituent of ribosome	regulation of biological process cell population proliferation regulation of cellular process positive regulation of cell population proliferation regulation of cell population proliferation biological regulation positive regulation of biological process cellular process positive regulation of cellular process cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus signaling regulation of biological process cell population proliferation regulation of cellular process positive regulation of cell population proliferation regulation of cell population proliferation biological regulation positive regulation of biological process cellular process positive regulation of cellular process cellular response to stimulus positive regulation of cell communication positive regulation of signal transduction response to stimulus signaling regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator signal transduction regulation of signaling positive regulation of intracellular signal transduction signal transduction by p53 class mediator regulation of response to stimulus regulation of cell communication positive regulation of signaling regulation of protein stability regulation of biological quality protein stabilization protein-DNA complex organization cellular component organization cellular component disassembly protein-containing complex organization protein-DNA complex disassembly protein-containing complex disassembly cellular component organization or biogenesis catabolic process negative regulation of biological process regulation of ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of primary metabolic process negative regulation of protein catabolic process modification-dependent macromolecule catabolic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process modification-dependent protein catabolic process metabolic process ubiquitin-dependent protein catabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process RNA metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process translation protein biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex ribosomal subunit ribonucleoprotein complex ribosome large ribosomal subunit organelle subcompartment cytoplasmic side of membrane membrane endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment bounding membrane of organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane cytosolic large ribosomal subunit cytosolic ribosome cytosol nucleoplasm
W [auth U]	Ribosomal protein eL22	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	translation at synapse primary metabolic process translation at presynapse translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process cytoplasmic translation	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit presynapse synapse cell junction glutamatergic synapse
V [auth T]	Ribosomal protein eL21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit membrane-bounded organelle membrane organelle membrane endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
U [auth S]	Ribosomal protein eL20	structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth R]	Ribosomal protein eL19	-	-	-
B [auth 7]	5S ribosomal RNA	-	-	-
S [auth Q]	Ribosomal protein eL18	-	-	-
R [auth P]	Ribosomal protein uL22	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth O]	Ribosomal protein uL13	-	-	-
P [auth N]	Ribosomal protein eL15	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth M]	Ribosomal protein eL14	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal large subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal large subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle membrane-bounded organelle intracellular anatomical structure organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure bounding membrane of organelle organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane protein-containing complex intracellular membraneless organelle ribosomal subunit cytosolic large ribosomal subunit cytosolic ribosome ribonucleoprotein complex membraneless organelle ribosome cytosol large ribosomal subunit
N [auth L]	Ribosomal protein eL13	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
M [auth J]	Ribosomal protein uL5	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction signal transduction by p53 class mediator regulation of response to stimulus regulation of cell communication cellular process positive regulation of signaling localization protein localization to organelle macromolecule localization protein localization to nucleus intracellular protein localization biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process catabolic process negative regulation of biological process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of ubiquitin-dependent protein catabolic process regulation of primary metabolic process negative regulation of protein catabolic process modification-dependent macromolecule catabolic process negative regulation of cellular process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of ubiquitin-dependent protein catabolic process negative regulation of catabolic process negative regulation of proteasomal ubiquitin-dependent protein catabolic process regulation of protein metabolic process negative regulation of metabolic process proteasomal protein catabolic process protein catabolic process regulation of macromolecule metabolic process regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process negative regulation of proteasomal protein catabolic process regulation of proteasomal protein catabolic process ubiquitin-dependent protein catabolic process regulation of metabolic process regulation of protein catabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex ribosomal subunit ribonucleoprotein complex ribosome large ribosomal subunit organelle subcompartment cytoplasmic side of membrane membrane endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment bounding membrane of organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane cytosolic large ribosomal subunit cytosolic ribosome cytosol nucleoplasm
L [auth I]	Ribosomal protein uL16	translation regulator activity structural molecule activity structural constituent of ribosome	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process developmental process multicellular organism development multicellular organismal process primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process developmental process multicellular organism development multicellular organismal process embryonic brain development anatomical structure development animal organ development embryonic organ development embryo development	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit membrane-bounded organelle organelle subcompartment cytoplasmic side of membrane protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit membrane-bounded organelle organelle subcompartment cytoplasmic side of membrane membrane intracellular membrane-bounded organelle endomembrane system side of membrane cytoplasmic side of rough endoplasmic reticulum membrane rough endoplasmic reticulum endoplasmic reticulum subcompartment bounding membrane of organelle rough endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane cytoplasm organelle membrane endoplasmic reticulum membrane cytosolic large ribosomal subunit cytosolic ribosome cytosol
K [auth H]	Ribosomal protein uL6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
J [auth G]	Ribosomal protein eL8	RNA binding binding nucleic acid binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
A [auth 5]	28S ribosomal RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H [auth E]	IPR005568	Large ribosomal subunit protein uL6, N-terminal	Domain
H [auth E]	IPR049633	Large ribosomal subunit protein eL6, conserved site	Conserved Site
H [auth E]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
H [auth E]	IPR041997	Large ribosomal subunit protein eL6, KOW domain	Domain
H [auth E]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
H [auth E]	IPR000915	Large ribosomal subunit protein eL6	Family
G [auth D]	IPR057268	Large ribosomal subunit protein uL18	Family
G [auth D]	IPR005485	Large ribosomal subunit protein uL18, eukaryota/archaea	Family
G [auth D]	IPR025607	Large ribosomal subunit protein uL18, C-terminal, eukaryotes	Domain
F [auth C]	IPR025755	Large ribosomal subunit protein uL4, C-terminal domain	Domain
F [auth C]	IPR002136	Large ribosomal subunit protein uL4	Family
F [auth C]	IPR013000	Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site	Conserved Site
F [auth C]	IPR045240	Large ribosomal subunit protein uL4, eukaryota/archaea	Family
F [auth C]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
QA [auth o]	IPR053708	Eukaryotic Ribosomal Large Subunit eL42	Homologous Superfamily
QA [auth o]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
QA [auth o]	IPR000552	Large ribosomal subunit protein eL42	Family
OA [auth m]	IPR019954	Ubiquitin conserved site	Conserved Site
OA [auth m]	IPR038587	Large ribosomal subunit protein eL40 superfamily	Homologous Superfamily
OA [auth m]	IPR000626	Ubiquitin-like domain	Domain
OA [auth m]	IPR019956	Ubiquitin domain	Domain
OA [auth m]	IPR050158	Ubiquitin and ubiquitin-like	Family
OA [auth m]	IPR001975	Large ribosomal subunit protein eL40 domain	Domain
OA [auth m]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
NA [auth l]	IPR023626	Large ribosomal subunit protein eL39 domain superfamily	Homologous Superfamily
NA [auth l]	IPR000077	Large ribosomal subunit protein eL39	Family
NA [auth l]	IPR020083	Large ribosomal subunit protein eL39, conserved site	Conserved Site
MA [auth k]	IPR002675	Large ribosomal subunit protein eL38	Family
MA [auth k]	IPR038464	Large ribosomal subunit protein eL38 superfamily	Homologous Superfamily
JA [auth h]	IPR001854	Large ribosomal subunit protein uL29	Family
JA [auth h]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
JA [auth h]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
JA [auth h]	IPR045059	Large ribosomal subunit protein uL29, eukaryota	Family
IA [auth g]	IPR008195	Large ribosomal subunit protein eL34	Family
IA [auth g]	IPR038562	Large ribosomal subunit protein eL34, C-terminal domain superfamily	Homologous Superfamily
IA [auth g]	IPR018065	Large ribosomal subunit protein eL34, conserved site	Conserved Site
GA [auth e]	IPR036351	Large ribosomal subunit protein eL32 superfamily	Homologous Superfamily
GA [auth e]	IPR001515	Large ribosomal subunit protein eL32	Family
GA [auth e]	IPR018263	Large ribosomal subunit protein eL32, conserved site	Conserved Site
FA [auth d]	IPR020052	Large ribosomal subunit protein eL31, conserved site	Conserved Site
FA [auth d]	IPR023621	Large ribosomal subunit protein eL31 domain superfamily	Homologous Superfamily
FA [auth d]	IPR000054	Large ribosomal subunit protein eL31	Family
EA [auth c]	IPR022991	Large ribosomal subunit protein eL30, conserved site	Conserved Site
EA [auth c]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
EA [auth c]	IPR000231	Large ribosomal subunit protein eL30	Family
EA [auth c]	IPR039109	Large ribosomal subunit protein eL30-like	Family
EA [auth c]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
DA [auth b]	IPR002673	Large ribosomal subunit protein eL29	Family
CA [auth a]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
CA [auth a]	IPR030878	Large ribosomal subunit protein uL15	Family
CA [auth a]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
CA [auth a]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
BA [auth Z]	IPR018262	Large ribosomal subunit protein eL27, conserved site	Conserved Site
BA [auth Z]	IPR038655	Large ribosomal subunit protein eL27 superfamily	Homologous Superfamily
BA [auth Z]	IPR005824	KOW	Domain
BA [auth Z]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
BA [auth Z]	IPR001141	Large ribosomal subunit protein eL27	Family
BA [auth Z]	IPR041991	Large ribosomal subunit protein eL27, KOW domain	Domain
AA [auth Y]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
AA [auth Y]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
AA [auth Y]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
AA [auth Y]	IPR005824	KOW	Domain
AA [auth Y]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AA [auth Y]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
Y [auth W]	IPR011017	TRASH domain	Domain
Y [auth W]	IPR056366	Large ribosomal subunit protein eL24	Family
Y [auth W]	IPR000988	Large ribosomal subunit protein eL24-related, N-terminal	Domain
Y [auth W]	IPR023442	Large ribosomal subunit protein eL24, conserved site	Conserved Site
Y [auth W]	IPR038630	Ribosomal protein L24e/L24 superfamily	Homologous Superfamily
X [auth V]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
X [auth V]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
X [auth V]	IPR000218	Large ribosomal subunit protein uL14	Family
W [auth U]	IPR002671	Large ribosomal subunit protein eL22	Family
W [auth U]	IPR038526	Large ribosomal subunit protein eL22 superfamily	Homologous Superfamily
V [auth T]	IPR018259	Large ribosomal subunit protein eL21, conserved site	Conserved Site
V [auth T]	IPR036948	Large ribosomal subunit protein eL21 superfamily	Homologous Superfamily
V [auth T]	IPR001147	Large ribosomal subunit protein eL21	Family
V [auth T]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
U [auth S]	IPR028877	Large ribosomal subunit protein eL20	Family
U [auth S]	IPR023573	Large ribosomal subunit protein eL20 domain	Domain
U [auth S]	IPR021138	Large ribosomal subunit protein eL20, eukaryota	Family
R [auth P]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
R [auth P]	IPR005721	Large ribosomal subunit protein uL22, eukaryota/archaea	Family
R [auth P]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
R [auth P]	IPR001063	Large ribosomal subunit protein uL22	Family
R [auth P]	IPR057265	Large ribosomal subunit protein uL22, archaea	Family
P [auth N]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
P [auth N]	IPR020925	Large ribosomal subunit protein eL15, conserved site	Conserved Site
P [auth N]	IPR024794	Large ribosomal subunit protein eL15 core domain superfamily	Homologous Superfamily
P [auth N]	IPR000439	Large ribosomal subunit protein eL15	Family
O [auth M]	IPR039660	Large ribosomal subunit protein eL14	Family
O [auth M]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
O [auth M]	IPR002784	Large ribosomal subunit protein eL14 domain	Domain
O [auth M]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
N [auth L]	IPR001380	Large ribosomal subunit protein eL13	Family
N [auth L]	IPR018256	Large ribosomal subunit protein eL13, conserved site	Conserved Site
M [auth J]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
M [auth J]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
M [auth J]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
M [auth J]	IPR057266	Large ribosomal subunit protein uL5, eukaryota/archaea	Family
M [auth J]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
M [auth J]	IPR002132	Large ribosomal subunit protein uL5	Family
L [auth I]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
L [auth I]	IPR018255	Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea	Conserved Site
L [auth I]	IPR047873	Large ribosomal subunit protein uL16	Family
L [auth I]	IPR001197	Large ribosomal subunit protein uL16, eukaryota/archaea	Family
L [auth I]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
K [auth H]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
K [auth H]	IPR002359	Large ribosomal subunit protein uL6, conserved site-2	Conserved Site
K [auth H]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
K [auth H]	IPR000702	Large ribosomal subunit protein uL6-like	Family
J [auth G]	IPR050257	Large ribosomal subunit protein eL8/uL1-like	Family
J [auth G]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
J [auth G]	IPR004037	Large ribosomal subunit protein eL8-like, conserved site	Conserved Site
J [auth G]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
J [auth G]	IPR018492	Ribosomal protein eL8/Nhp2 family	Family
J [auth G]	IPR001921	Large ribosomal subunit protein eL8, eukaryota	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.