3J17 | pdb_00003j17

Structure of a transcribing cypovirus by cryo-electron microscopy


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ERrf2e3j17E1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: Rrf2ECOD (v294.1)
DLidA_Long_CCe3j17D1 A: a/b three-layered sandwichesX: LidAH: LidAT: LidAF: LidA_Long_CCECOD (v294.1)
CVP1_protrusione3j17C1 A: a/b three-layered sandwichesX: SSHS domainH: SSHS domain in type II DNA topoisomeraseT: SSHS domain in type II DNA topoisomeraseF: VP1_protrusionECOD (v294.1)
Be3j17B3 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF:ECOD (v294.1)
AGlyco_hydro_35e3j17A1 A: a/b three-layered sandwichesX: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitH: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitT: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitF: Glyco_hydro_35ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, E
Structural protein VP5- - -
B, C
VP1- -
Structural protein VP3- - -

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
GPL Parent Component: LYS

RESIDAA0228

PSI-MOD :  N6-(phospho-5'-guanosine)-L-lysine MOD:00233