3J08
High resolution helical reconstruction of the bacterial p-type ATPase copper transporter CopA
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | HAD-like | 8037720 | 3001890 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Metal cation-transporting ATPase, ATP-binding domain N | 8037721 | 3000981 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | HAD-like | 8037720 | 3001890 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Metal cation-transporting ATPase, ATP-binding domain N | 8037721 | 3000981 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | HAD-like | 8037720 | 3001890 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | HAD-like | 8037720 | 3001890 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | E1-E2_ATPase_N | e3j08A2 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: E1-E2_ATPase_N | ECOD (1.6) |
A | E1-E2_ATPase_C | e3j08A1 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Copper efflux ATPase transmembrane domain | F: E1-E2_ATPase_C | ECOD (1.6) |
A | P-type_ATPase_Cu-like | e3j08A4 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: P-type_ATPase_Cu-like | ECOD (1.6) |
A | Hydrolase_3_1 | e3j08A3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: Hydrolase_3_1 | ECOD (1.6) |
B | E1-E2_ATPase_N | e3j08B6 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: E1-E2_ATPase_N | ECOD (1.6) |
B | E1-E2_ATPase_C | e3j08B5 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Copper efflux ATPase transmembrane domain | F: E1-E2_ATPase_C | ECOD (1.6) |
B | P-type_ATPase_Cu-like | e3j08B4 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: P-type_ATPase_Cu-like | ECOD (1.6) |
B | Hydrolase_3_1 | e3j08B3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: Hydrolase_3_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00702 | haloacid dehalogenase-like hydrolase (Hydrolase) | haloacid dehalogenase-like hydrolase | This family is structurally different from the alpha/beta hydrolase family (Pfam:PF00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted fo ... | Domain | |
PF00122 | E1-E2 ATPase (E1-E2_ATPase) | E1-E2 ATPase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017969 | Heavy-metal-associated, conserved site | Conserved Site | |
IPR023214 | HAD superfamily | Homologous Superfamily | |
IPR006121 | Heavy metal-associated domain, HMA | Domain | |
IPR008250 | P-type ATPase, A domain superfamily | Homologous Superfamily | |
IPR001757 | P-type ATPase | Family | |
IPR044492 | P-type ATPase, haloacid dehalogenase domain | Domain | |
IPR027256 | P-type ATPase, subfamily IB | Family | |
IPR018303 | P-type ATPase, phosphorylation site | PTM | |
IPR036412 | HAD-like superfamily | Homologous Superfamily | |
IPR023298 | P-type ATPase, transmembrane domain superfamily | Homologous Superfamily | |
IPR006122 | Heavy metal-associated domain, copper ion-binding | Domain | |
IPR036163 | Heavy metal-associated domain superfamily | Homologous Superfamily | |
IPR023299 | P-type ATPase, cytoplasmic domain N | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | P-type ATPase (P-ATPase) | Copper-transporting P-type ATPase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |