3IMO

Structure from the mobile metagenome of Vibrio cholerae. Integron cassette protein VCH_CASS14

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF18315e3imoB1 A: a+b two layersX: Integron cassette protein VCH_CASS14 (From Topology)H: Integron cassette protein VCH_CASS14 (From Topology)T: Integron cassette protein VCH_CASS14F: PF18315ECOD (1.6)
CPF18315e3imoC1 A: a+b two layersX: Integron cassette protein VCH_CASS14 (From Topology)H: Integron cassette protein VCH_CASS14 (From Topology)T: Integron cassette protein VCH_CASS14F: PF18315ECOD (1.6)
DPF18315e3imoD1 A: a+b two layersX: Integron cassette protein VCH_CASS14 (From Topology)H: Integron cassette protein VCH_CASS14 (From Topology)T: Integron cassette protein VCH_CASS14F: PF18315ECOD (1.6)
APF18315e3imoA1 A: a+b two layersX: Integron cassette protein VCH_CASS14 (From Topology)H: Integron cassette protein VCH_CASS14 (From Topology)T: Integron cassette protein VCH_CASS14F: PF18315ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.920.70 Alpha Beta 2-Layer Sandwich Metal Transport, Frataxin Chain ACATH (4.3.0)
C3.30.920.70 Alpha Beta 2-Layer Sandwich Metal Transport, Frataxin Chain ACATH (4.3.0)
D3.30.920.70 Alpha Beta 2-Layer Sandwich Metal Transport, Frataxin Chain ACATH (4.3.0)
A3.30.920.70 Alpha Beta 2-Layer Sandwich Metal Transport, Frataxin Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF18315Integron cassette protein VCH_CASS1 chain (VCH_CASS14)Integron cassette protein VCH_CASS1 chainThis domain is a chain that forms part of the integron cassette protein VCH_CASS14 present in Vibrio cholerae. In each monomer lies a deep binding pocket for small molecule substrates formed by helices alpha-1 and alpha-2 and residues from the centra ...This domain is a chain that forms part of the integron cassette protein VCH_CASS14 present in Vibrio cholerae. In each monomer lies a deep binding pocket for small molecule substrates formed by helices alpha-1 and alpha-2 and residues from the central four strands of the beta-sheet. The pocket is extensively lined with hydrophobic side chains [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR040614Integron cassette protein VCH_CASS1 chainDomain