3I9H | pdb_00003i9h

Crystal structure of a betagamma-crystallin domain from Clostridium beijerinckii

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d3i9hh_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
G	d3i9hg_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
F	d3i9hf_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
E	d3i9he_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
D	d3i9hd_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
C	d3i9hc_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
B	d3i9hb_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)
A	d3i9ha_	All beta proteins	gamma-Crystallin-like	gamma-Crystallin-like	automated matches	automated matches	Clostridium acetobutylicum (Clostridium beijerinckii NCIMB 8052 ) [TaxId: 290402 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
E	SCOP2 Family	Crystallins/Ca-binding development proteins	8071343	4002359	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	gamma-Crystallin-like	8071344	3001138	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Crystall_3	e3i9hH1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
G	Crystall_3	e3i9hG1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
F	Crystall_3	e3i9hF1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
E	Crystall_3	e3i9hE1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
D	Crystall_3	e3i9hD1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
C	Crystall_3	e3i9hC1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
B	Crystall_3	e3i9hB1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)
A	Crystall_3	e3i9hA1	A: beta sandwiches	X: gamma-Crystallin-like (From Topology)	H: gamma-Crystallin-like (From Topology)	T: gamma-Crystallin-like	F: Crystall_3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
G	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
F	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
E	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
D	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
C	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
B	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)
A	2.60.20.10	Mainly Beta	Sandwich	Gamma-B Crystallin	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Beta and gamma crystallin	binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001064	Beta/gamma crystallin	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011024	Gamma-crystallin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR047569	Carbohydrate binding module family 56	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR042517	Beta-1,3-glucanase, N-terminal, subdomain 2	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032477	Glycoside hydrolase 64	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR037398	Glucan endo-1,3-beta-glucosidase	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR037176	Osmotin/thaumatin-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.