3GZT | pdb_00003gzt

VP7 recoated rotavirus DLP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
M [auth Q]VP7_2nde3gztQ1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
M [auth Q]VP7_1ste3gztQ2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
L [auth P]VP7_2nde3gztP1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
L [auth P]VP7_1ste3gztP2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
K [auth O]VP7_2nde3gztO1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
K [auth O]VP7_1ste3gztO2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
J [auth N]VP7_2nde3gztN1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
J [auth N]VP7_1ste3gztN2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
I [auth M]VP7_2nde3gztM1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
I [auth M]VP7_1ste3gztM2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
H [auth L]VP7_2nde3gztL1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
H [auth L]VP7_1ste3gztL2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
G [auth K]VP7_2nde3gztK1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
G [auth K]VP7_1ste3gztK2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
F [auth J]VP7_2nde3gztJ1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
F [auth J]VP7_1ste3gztJ2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
E [auth I]VP7_2nde3gztI1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
E [auth I]VP7_1ste3gztI2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
D [auth H]VP7_2nde3gztH1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
D [auth H]VP7_1ste3gztH2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
C [auth G]VP7_2nde3gztG1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
C [auth G]VP7_1ste3gztG2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
B [auth F]VP7_2nde3gztF1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
B [auth F]VP7_1ste3gztF2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)
A [auth B]VP7_2nde3gztB1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)T: Jelly-roll domain in outer capsid glycoprotein VP7F: VP7_2ndECOD (1.6)
A [auth B]VP7_1ste3gztB2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)T: Flavodoxin-like domain in outer capsid glycoprotein VP7F: VP7_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
M [auth Q]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
M [auth Q]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
L [auth P]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
L [auth P]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
K [auth O]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
K [auth O]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
J [auth N]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
J [auth N]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
I [auth M]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
I [auth M]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
H [auth L]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
H [auth L]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
G [auth K]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
G [auth K]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
F [auth J]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
F [auth J]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
E [auth I]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
E [auth I]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
D [auth H]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
D [auth H]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
C [auth G]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
C [auth G]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
B [auth F]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
B [auth F]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)
A [auth B]3.40.50.11130 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glycoprotein VP7, domain 1CATH (4.3.0)
A [auth B]2.60.120.800 Mainly Beta Sandwich Jelly Rolls Rotavirus outer-layer protein VP7, domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage