3GWY | pdb_00003gwy

Crystal structure of putative CTP pyrophosphohydrolase from Bacteroides fragilis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3gwyb1	Alpha and beta proteins (a+b)	Nudix	Nudix	automated matches	automated matches	(Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ],	SCOPe (2.08)
B	d3gwyb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ],	SCOPe (2.08)
B	d3gwyb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ],	SCOPe (2.08)
A	d3gwya1	Alpha and beta proteins (a+b)	Nudix	Nudix	automated matches	automated matches	(Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ],	SCOPe (2.08)
A	d3gwya2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	NUDIX	e3gwyB1	A: a+b two layers	X: beta-Grasp	H: Nudix (From Topology)	T: Nudix	F: NUDIX	ECOD (1.6)
A	NUDIX	e3gwyA1	A: a+b two layers	X: beta-Grasp	H: Nudix (From Topology)	T: Nudix	F: NUDIX	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.90.79.10	Alpha Beta	Alpha-Beta Complex	Nucleoside Triphosphate Pyrophosphohydrolase	Nucleoside Triphosphate Pyrophosphohydrolase	CATH (4.2.0)
A	3.90.79.10	Alpha Beta	Alpha-Beta Complex	Nucleoside Triphosphate Pyrophosphohydrolase	Nucleoside Triphosphate Pyrophosphohydrolase	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00293	NUDIX domain (NUDIX)	NUDIX domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Putative CTP pyrophosphohydrolase	pyrophosphatase activity 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity nucleoside triphosphate diphosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity 8-oxo-GDP phosphatase activity nucleoside diphosphate phosphatase activity cation binding ion binding binding metal ion binding pyrophosphatase activity 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity nucleoside triphosphate diphosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity 8-oxo-GDP phosphatase activity nucleoside diphosphate phosphatase activity cation binding ion binding binding metal ion binding small molecule binding 8-oxo-dGDP phosphatase activity	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000086	NUDIX hydrolase domain	Domain
A, B	IPR015797	NUDIX hydrolase-like domain superfamily	Homologous Superfamily
A, B	IPR047127	Mutator MutT-like	Family
A, B	IPR020476	NUDIX hydrolase	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.