3G9W | pdb_00003g9w

Crystal Structure of Talin2 F2-F3 in Complex with the Integrin Beta1D Cytoplasmic Tail

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3g9wb1 All alpha proteins Acyl-CoA binding protein-like Second domain of FERM Second domain of FERM automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd3g9wb2 All beta proteins PH domain-like barrel PH domain-like automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3g9wa1 All alpha proteins Acyl-CoA binding protein-like Second domain of FERM Second domain of FERM automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3g9wa2 All beta proteins PH domain-like barrel PH domain-like automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3g9wa3 Artifacts Tags Tags Tags N-terminal Tags mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DIntegrin_b_cyte3g9wD1 A: extended segmentsX: Integrin beta-1D cytoplasmic tail (From Topology)H: Integrin beta-1D cytoplasmic tail (From Topology)T: Integrin beta-1D cytoplasmic tailF: Integrin_b_cytECOD (1.6)
CIntegrin_b_cyte3g9wC1 A: extended segmentsX: Integrin beta-1D cytoplasmic tail (From Topology)H: Integrin beta-1D cytoplasmic tail (From Topology)T: Integrin beta-1D cytoplasmic tailF: Integrin_b_cytECOD (1.6)
BIRS_1e3g9wB1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: IRS_1ECOD (1.6)
BFERM_Me3g9wB2 A: alpha bundlesX: Acyl-CoA binding protein-like (From Topology)H: Acyl-CoA binding protein-like (From Topology)T: Acyl-CoA binding protein-likeF: FERM_MECOD (1.6)
AIRS_1e3g9wA2 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: IRS_1ECOD (1.6)
AFERM_Me3g9wA1 A: alpha bundlesX: Acyl-CoA binding protein-like (From Topology)H: Acyl-CoA binding protein-like (From Topology)T: Acyl-CoA binding protein-likeF: FERM_MECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.80.10 Mainly Alpha Up-down Bundle Acyl-CoA Binding Protein CATH (4.3.0)
B2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (4.3.0)
A1.20.80.10 Mainly Alpha Up-down Bundle Acyl-CoA Binding Protein CATH (4.3.0)
A2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF08725Integrin beta cytoplasmic domain (Integrin_b_cyt)Integrin beta cytoplasmic domainIntegrins are a group of transmembrane proteins which function as extracellular matrix receptors and in cell adhesion. Integrins are ubiquitously expressed and are heterodimeric, each composed of an alpha and beta subunit. Several variations of the ...Integrins are a group of transmembrane proteins which function as extracellular matrix receptors and in cell adhesion. Integrins are ubiquitously expressed and are heterodimeric, each composed of an alpha and beta subunit. Several variations of the the alpha and beta subunits exist, and association of different alpha and beta subunits can have different a different binding specificity. This domain corresponds to the cytoplasmic domain of the beta subunit.
Domain
A, B
PF02174PTB domain (IRS-1 type) (IRS)PTB domain (IRS-1 type)Domain
A, B
PF00373FERM central domain (FERM_M)FERM central domainThis domain is the central structural domain of the FERM domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Integrin beta-1D
A, B
Talin-2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C, D
IPR033760Integrin beta N-terminalDomain
C, D
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
C, D
IPR032695Integrin domain superfamilyHomologous Superfamily
C, D
IPR002369Integrin beta subunit, VWA domainDomain
C, D
IPR040622Integrin beta, epidermal growth factor-like domain 1Domain
C, D
IPR036349Integrin beta tail domain superfamilyHomologous Superfamily
C, D
IPR014836Integrin beta subunit, cytoplasmic domainDomain
C, D
IPR012896Integrin beta subunit, tailDomain
C, D
IPR013111Epidermal growth factor-like domain, extracellularDomain
C, D
IPR015812Integrin beta subunitFamily
C, D
IPR016201PSI domainDomain
A, B
IPR000299FERM domainDomain
A, B
IPR002404IRS-type PTB domainDomain
A, B
IPR014352FERM/acyl-CoA-binding protein superfamilyHomologous Superfamily
A, B
IPR019748FERM central domainDomain
A, B
IPR015009Vinculin-binding site-containing domainDomain
A, B
IPR032425Talin, N-terminal F0 domainDomain
A, B
IPR011993PH-like domain superfamilyHomologous Superfamily
A, B
IPR035964I/LWEQ domain superfamilyHomologous Superfamily
A, B
IPR015224Talin, centralDomain
A, B
IPR054082Talin, IBS2B domainDomain
A, B
IPR019749Band 4.1 domainDomain
A, B
IPR035963FERM superfamily, second domainHomologous Superfamily
A, B
IPR036476Talin, central domain superfamilyHomologous Superfamily
A, B
IPR036723Alpha-catenin/vinculin-like superfamilyHomologous Superfamily
A, B
IPR002558I/LWEQ domainDomain
A, B
IPR019747FERM conserved siteConserved Site
A, B
IPR054060Talin 1-like, rod-segment domainDomain
A, B
IPR018979FERM, N-terminalDomain
A, B
IPR049108Talin, R4 domainDomain
A, B
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
A, B
IPR037438Talin-1/2, rod-segmentDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C, D
Pharos:  P05556

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D
OPMTransmembraneBitopic proteinsIntegrinIntegrin