3G5C | pdb_00003g5c

Structural and biochemical studies on the ectodomain of human ADAM22

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Ribosomal_S6e	e3g5cB1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: Ribosomal_S6e	ECOD (v294.1)
B	Big_10	e3g5cB3	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: Big_10	ECOD (v294.1)
B	Ephrin_lbd	e3g5cB6	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Ephrin_lbd	ECOD (v294.1)
A	RA	e3g5cA1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: RA	ECOD (v294.1)
A	HAMP	e3g5cA2	A: a/b three-layered sandwiches	X: HAMP domain	H: HAMP domain	T: HAMP domain	F: HAMP	ECOD (v294.1)
A	Lipase_GDSL_2	e3g5cA6	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: PreATP-grasp domain	F: Lipase_GDSL_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.390.10	Alpha Beta	3-Layer(aba) Sandwich	Collagenase (Catalytic Domain)	Collagenase (Catalytic Domain)	CATH (4.3.0)
B	4.10.70.10	Few Secondary Structures	Irregular	Echistatin	Disintegrin domain	CATH (4.3.0)
A	3.40.390.10	Alpha Beta	3-Layer(aba) Sandwich	Collagenase (Catalytic Domain)	Collagenase (Catalytic Domain)	CATH (4.3.0)
A	4.10.70.10	Few Secondary Structures	Irregular	Echistatin	Disintegrin domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08516	ADAM cysteine-rich (ADAM_CR)	ADAM cysteine-rich	-	Family
A, B	PF00200	Disintegrin (Disintegrin)	Disintegrin		Domain
A, B	PF01421	Reprolysin (M12B) family zinc metalloprotease (Reprolysin)	Reprolysin (M12B) family zinc metalloprotease	The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family are also known as adamalysins. Most members of this family are snake venom endopeptidases, but there are also some mammal ...	The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family are also known as adamalysins. Most members of this family are snake venom endopeptidases, but there are also some mammalian proteins such as Swiss:P78325, and fertilin Swiss:Q28472. Fertilin and closely related proteins appear to not have some active site residues and may not be active enzymes.	Domain
A, B	PF07974	EGF-like domain (EGF_2)	EGF-like domain	This family contains EGF domains found in a variety of extracellular proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	ADAM 22	molecular transducer activity signaling receptor activity cell adhesion molecule binding protein-containing complex binding protein binding binding integrin binding signaling receptor binding peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity molecular transducer activity signaling receptor activity cell adhesion molecule binding protein-containing complex binding protein binding binding integrin binding signaling receptor binding peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity	developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development cell adhesion cellular process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development cell adhesion cellular process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process positive regulation of cell communication trans-synaptic signaling regulation of signaling regulation of biological process regulation of cellular process signaling modulation of chemical synaptic transmission biological regulation positive regulation of biological process positive regulation of synaptic transmission cell-cell signaling cell communication chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication positive regulation of cellular process positive regulation of signaling regulation of cell adhesion negative regulation of cellular process negative regulation of biological process negative regulation of cell adhesion	postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region axon cell projection neuron projection plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR034027	Reprolysin domain, adamalysin-type	Domain
A, B	IPR024079	Metallopeptidase, catalytic domain superfamily	Homologous Superfamily
A, B	IPR018358	Disintegrin, conserved site	Conserved Site
A, B	IPR001762	Disintegrin domain	Domain
A, B	IPR013111	Epidermal growth factor-like domain, extracellular	Domain
A, B	IPR002870	Peptidase M12B, propeptide	Domain
A, B	IPR001590	Peptidase M12B, ADAM/reprolysin	Domain
A, B	IPR006586	ADAM, cysteine-rich domain	Domain
A, B	IPR036436	Disintegrin domain superfamily	Homologous Superfamily
A, B	IPR000742	EGF-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q9P0K1	pilocytic astrocytoma psoriasis ulcerative colitis acute myeloid leukemia atypical teratoid rhabdoid tumor epilepsy large cell medulloblastoma malignant colon neoplasm malignant mesothelioma osteosarcoma pituitary cancer subependymal giant cell astrocytoma adrenal cortex carcinoma cutaneous lupus erythematosus glioblastoma pilocytic astrocytoma psoriasis ulcerative colitis acute myeloid leukemia atypical teratoid rhabdoid tumor epilepsy large cell medulloblastoma malignant colon neoplasm malignant mesothelioma osteosarcoma pituitary cancer subependymal giant cell astrocytoma adrenal cortex carcinoma cutaneous lupus erythematosus glioblastoma lung cancer malignant ependymoma medulloblastoma Pick disease primitive neuroectodermal tumor transitional cell carcinoma atopic eczema developmental and epileptic encephalopathy, 61 interstitial cystitis lung carcinoma malignant glioma nasopharyngeal carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.