Crystal structure of dimeric protein of unknown function and ferredoxin-like fold (YP_212648.1) from Bacteroides fragilis NCTC 9343 at 1.85 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3fmbb1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Dimeric alpha+beta barrel | automated matches | automated matches | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
| B | d3fmbb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
| A | d3fmba1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Dimeric alpha+beta barrel | automated matches | automated matches | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
| A | d3fmba2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | NusG | e3fmbB1 | A: alpha bundles | X: HTH | H: Nudix | T: Nudix | F: NusG | ECOD (develop294) |
| A | Trans_reg_C | e3fmbA1 | A: alpha bundles | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Trans_reg_C | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.70.100 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.30.70.100 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013097 | Stress responsive alpha+beta-barrel | Domain | |
| IPR011008 | Dimeric alpha-beta barrel | Homologous Superfamily |
