3FD2

Crystal structure of mMsoI/DNA complex with calcium

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3fd2a1 Alpha and beta proteins (a+b) Homing endonuclease-like Homing endonucleases Group I mobile intron endonuclease automated matches (Monomastix sp. OKE-1 ) [TaxId: 141716 ], (Monomastix sp. OKE-1 ) [TaxId: 141716 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyHoming endonucleases8032721 3000266 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALAGLIDADG_1e3fd2A1 A: a+b two layersX: Homing endonucleases-likeH: Homing endonucleases (From Topology)T: Homing endonucleasesF: LAGLIDADG_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00961LAGLIDADG endonuclease (LAGLIDADG_1)LAGLIDADG endonuclease- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Site-specific DNA endonuclease I-MsoI -
5'-D(*GP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*CP*CP*G)-3'---
5'-D(*CP*GP*GP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*CP*TP*GP*C)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR004860Homing endonuclease, LAGLIDADGDomain
IPR027434Homing endonucleaseHomologous Superfamily