3FBM
D431N Mutant VP2 Protein of Infectious Bursal Disease Virus; Derived T=1 Particles
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3fbma_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Positive stranded ssRNA viruses | Birnaviridae-like VP | automated matches | IBDV (Infectious bursal disease virus ) [TaxId: 10995 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8089992 | 3000918 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8089992 | 3000918 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8089354 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Birna_VP2 | e3fbmA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Birna_VP2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
A | 2.60.120.660 | Mainly Beta | Sandwich | Jelly Rolls | icosahedral virus | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01766 | Birnavirus VP2 protein (Birna_VP2) | Birnavirus VP2 protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Polyprotein |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
IPR043048 | Birnavirus VP3, domain 1 | Homologous Superfamily | |
IPR025775 | Birnavirus VP4 protease domain | Domain | |
IPR043049 | Birnavirus VP3, domain 2 | Homologous Superfamily | |
IPR002662 | Birnavirus VP2 protein | Family | |
IPR002663 | Birnavirus VP3 protein | Family |