3F3H | pdb_00003f3h

Crystal structure and anti-tumor activity of LZ-8 from the fungus Ganoderma lucidium

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3f3hb_	All beta proteins	Immunoglobulin-like beta-sandwich	Fungal immunomodulatory protein, FIP	Fungal immunomodulatory protein, FIP	automated matches	Bracket fungus (Ganoderma lucidum ) [TaxId: 5315 ],	SCOPe (2.08)
A	d3f3ha_	All beta proteins	Immunoglobulin-like beta-sandwich	Fungal immunomodulatory protein, FIP	Fungal immunomodulatory protein, FIP	automated matches	Bracket fungus (Ganoderma lucidum ) [TaxId: 5315 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	FIP-like	8083364	3002056	SCOP2B (2022-06-29)
A	SCOP2 Family	Fungal immunomodulatory protein, FIP	8083363	4007544	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	FIP-like	8083364	3002056	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	HTH_3	e3f3hB1	A: alpha bundles	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: HTH_3	ECOD (develop294)
A	Fve	e3f3hA1	A: alpha bundles	X: Spectrin repeat-like	H: SH3	T: SH3	F: Fve	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.1790	Mainly Beta	Sandwich	Immunoglobulin-like	Fungal immunomodulatory protein Fve	CATH (4.3.0)
A	2.60.40.1790	Mainly Beta	Sandwich	Immunoglobulin-like	Fungal immunomodulatory protein Fve	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Immunomodulatory protein Ling Zhi-8	binding carbohydrate binding	regulation of biological process immune system process biological regulation regulation of immune system process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR053742	Fungal Immunomodulatory Lectin	Homologous Superfamily
A, B	IPR036344	Fungal immunomodulatory protein FIP-Fve superfamily	Homologous Superfamily
A, B	IPR015339	Immunomodulatory protein FIP-Fve, fungal	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.