3F1S
Crystal structure of Protein Z complexed with protein Z-dependent inhibitor
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3f1sa_ | Multi-domain proteins (alpha and beta) | Serpins | Serpins | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Trypsin_1 | e3f1sB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
B | FXa_inhibition | e3f1sB4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: FXa_inhibition | ECOD (1.6) |
A | Serpin | e3f1sA1 | A: a+b complex topology | X: Serpins (From Topology) | H: Serpins (From Topology) | T: Serpins | F: Serpin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
B | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
A | 3.30.497.10 | Alpha Beta | 2-Layer Sandwich | Antithrombin | Chain I, domain 2 | CATH (4.3.0) |
A | 2.30.39.10 | Mainly Beta | Roll | Alpha-1-antitrypsin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12662 | Complement Clr-like EGF-like (cEGF) | Complement Clr-like EGF-like | cEGF, or complement Clr-like EGF, domains have six conserved cysteine residues disulfide-bonded into the characteristic pattern 'ababcc'. They are found in blood coagulation proteins such as fibrillin, Clr and Cls, thrombomodulin, and the LDL recepto ... | Domain | |
PF00089 | Trypsin (Trypsin) | Trypsin | - | Domain | |
PF00079 | Serpin (serine protease inhibitor) (Serpin) | Serpin (serine protease inhibitor) | Structure is a multi-domain fold containing a bundle of helices and a beta sandwich. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050442 | Peptidase S1 family, coagulation factors | Family | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR000294 | Gamma-carboxyglutamic acid-rich (GLA) domain | Domain | |
IPR017857 | Coagulation factor-like, Gla domain superfamily | Homologous Superfamily | |
IPR001254 | Serine proteases, trypsin domain | Domain | |
IPR035972 | Gamma-carboxyglutamic acid-rich (GLA) domain superfamily | Homologous Superfamily | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR000742 | EGF-like domain | Domain | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PTM | |
IPR012224 | Peptidase S1A, coagulation factor VII/IX/X/C/Z | Family | |
IPR033835 | Protein Z-dependent peptidase inhibitor, serpin domain | Domain | |
IPR000215 | Serpin family | Family | |
IPR023796 | Serpin domain | Domain | |
IPR042178 | Serpin superfamily, domain 1 | Homologous Superfamily | |
IPR042185 | Serpin superfamily, domain 2 | Homologous Superfamily | |
IPR036186 | Serpin superfamily | Homologous Superfamily |