Novel fold of VirA, a type III secretion system effector protein from Shigella flexneri
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Lipoprotein_1 | e3ee1B1 | A: beta barrels | X: HAMP domain | H: HAMP domain | T: HAMP domain | F: Lipoprotein_1 | ECOD (v294.2) |
| A | AAA_2 | e3ee1A1 | A: beta barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: AAA_2 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.10.450.460 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
| A | 3.10.450.460 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Effector protein virA |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR043098 | Cysteine protease, VirA/EspG, N-terminal | Homologous Superfamily | |
| IPR009669 | Cysteine protease, VirA/EspG | Family |
