Novel dimerization motif in the DEAD box RNA helicase Hera: form 1, complete dimer, asymmetric
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | EUF08190 | e3easA2 | A: alpha duplicates or obligate multimers | X: RNA helicase Hera dimerization domain (From Topology) | H: RNA helicase Hera dimerization domain (From Topology) | T: RNA helicase Hera dimerization domain | F: EUF08190 | ECOD (1.6) |
| A | Helicase_C_1 | e3easA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_1 | ECOD (1.6) |
| B | EUF08190 | e3easB2 | A: alpha duplicates or obligate multimers | X: RNA helicase Hera dimerization domain (From Topology) | H: RNA helicase Hera dimerization domain (From Topology) | T: RNA helicase Hera dimerization domain | F: EUF08190 | ECOD (1.6) |
| B | Helicase_C_1 | e3easB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Helicase_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.2.0) |
| A | 6.10.250.710 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.2.0) | |
| B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.2.0) |
| B | 6.10.250.710 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001650 | Helicase, C-terminal domain-like | Domain | |
| IPR000629 | ATP-dependent RNA helicase DEAD-box, conserved site | Conserved Site | |
| IPR050079 | DEAD box RNA helicase | Family | |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
| IPR048768 | RNA helicase Hera-like, dimerization domain | Domain | |
| IPR014014 | RNA helicase, DEAD-box type, Q motif | Domain | |
| IPR054525 | DEAD box helicase Hera, RNA-binding domain | Domain | |
| IPR011545 | DEAD/DEAH-box helicase domain | Domain | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |














