Structure of a type six secretion system protein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3eaab_ | All beta proteins | Hcp1-like | Hcp1-like | automated matches | automated matches | (Edwardsiella tarda ) [TaxId: 636 ], | SCOPe (2.08) |
| A | d3eaaa_ | All beta proteins | Hcp1-like | Hcp1-like | automated matches | automated matches | (Edwardsiella tarda ) [TaxId: 636 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | T6SS_HCP | e3eaaB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: T6SS_HCP | ECOD (1.6) |
| A | T6SS_HCP | e3eaaA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: T6SS_HCP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
| A | 2.30.110.20 | Mainly Beta | Roll | Pnp Oxidase | Chain A | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036624 | Hcp1-like superfamily | Homologous Superfamily | |
| IPR053165 | HSI-I assembly protein Hcp1 | Family | |
| IPR008514 | Type VI secretion system effector Hcp | Domain |
