3DKA | pdb_00003dka

Crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 A resolution

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	DinB	e3dkaB1	A: alpha bundles	X: YfiT-like putative metal-dependent hydrolases (From Topology)	H: YfiT-like putative metal-dependent hydrolases (From Topology)	T: YfiT-like putative metal-dependent hydrolases	F: DinB	ECOD (1.6)
A	DinB	e3dkaA1	A: alpha bundles	X: YfiT-like putative metal-dependent hydrolases (From Topology)	H: YfiT-like putative metal-dependent hydrolases (From Topology)	T: YfiT-like putative metal-dependent hydrolases	F: DinB	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.120.450	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	dinb family like domain	CATH (4.3.0)
A	1.20.120.450	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	dinb family like domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	DinB-like Protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR007837	DNA damage-inducible protein DinB	Family
A, B	IPR034660	DinB/YfiT-like putative metalloenzymes	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.