3DF7 | pdb_00003df7

Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e3df7A1	A: Alpha-beta plaits	X: HUP domains	H: HUP domains	T: ATP-grasp_3	F:	ECOD (20:10:01)
A		e3df7A2	A: Alpha-beta plaits	X: HUP domains	H: HUP domains	T: Gag_p17	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.11770	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
A	3.30.470.20	Alpha Beta	2-Layer Sandwich	D-amino Acid Aminotransferase	Chain A, domain 1	CATH (4.3.0)
A	2.30.36.100	Mainly Beta	Roll	Actin	Chain A, domain 2	CATH (4.3.0)
A	4.10.80.280	Few Secondary Structures	Irregular	Rhinovirus 14, subunit 4		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF18301	pre ATP-grasp 3 domain (preATP-grasp_3)	pre ATP-grasp 3 domain	This domain is found just before the N-terminal of the ATP grasp 3 domain (Pfam:PF02655). The domain is carried by species such as Azospirillum brasilense and Methylobacter tundripaludum.	Domain
A	PF02655	ATP-grasp domain (ATP-grasp_3)	ATP-grasp domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Putative ATP-grasp superfamily protein	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR011761	ATP-grasp fold	Domain
A	IPR024710	Tyramine--L-glutamate ligase	Family
A	IPR003806	ATP-grasp fold, PylC-type	Domain
A	IPR040803	Tyramine--L-glutamate ligase, pre ATP-grasp domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.