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 3D6W | pdb_00003d6w

LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyChromo domain-like 8092315 3000161 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyChromo domain-like 8092316 3000161 SCOP2B (2022-06-29)
ASCOP2 FamilyLytTr domain-like 8045873 4004734 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyChromo domain-like 8092315 3000161 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyChromo domain-like 8092316 3000161 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be3d6wB1 A: alpha arraysX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF:ECOD (v295.2)
A2OG-FeII_Oxy_4e3d6wA1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: 2OG-FeII_Oxy_4ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.50.40 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)
B2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
A2.40.50.40 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) CATH (4.3.0)
A2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Methyl-accepting/DNA response regulator - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012072LytTR signal transduction protein, putativeFamily
A, B
IPR007492LytTR DNA-binding domainDomain
A, B
IPR046947Transcriptional regulatory protein LytR-likeFamily