Structure of PurLQS from Thermotoga maritima
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| G | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | PurS-like | 8043168 | 3000512 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | PurM N-terminal domain-like | 8042410 | 3001759 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | PurM C-terminal domain-like | 8042412 | 3000696 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | PurM C-terminal domain-like | 8042413 | 3000696 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | PurM N-terminal domain-like | 8042411 | 3001759 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L | RasGEF | e3d54L1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| H | RasGEF | e3d54H1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| D | Phage_endo_I | e3d54D1 | A: a/b three-layered sandwiches | X: Profilin-like | H: sensor domains | T: sensor domains | F: Phage_endo_I | ECOD (v294.1) |
| G | RasGEF | e3d54G1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| K | RasGEF | e3d54K1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| J | RasGEF | e3d54J1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| F | RasGEF | e3d54F1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| C | RasGEF | e3d54C1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: RasGEF | ECOD (v294.1) |
| B | AA_kinase | e3d54B1 | A: a/b three-layered sandwiches | X: Profilin-like | H: sensor domains | T: sensor domains | F: AA_kinase | ECOD (v294.1) |
| I | EF-hand_1,S_100 | e3d54I1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | F: EF-hand_1,S_100 | ECOD (v294.1) |
| I | GATase_2 | e3d54I2 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: General secretion pathway protein M (EpsM) periplasmic domain-related | T: General secretion pathway protein M (EpsM) periplasmic domain-related | F: GATase_2 | ECOD (v294.1) |
| I | Ribonuc_L-PSP | e3d54I4 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Ribonuc_L-PSP | ECOD (v294.1) |
| E | EF-hand_1,S_100 | e3d54E1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | F: EF-hand_1,S_100 | ECOD (v294.1) |
| E | GATase_2 | e3d54E2 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: General secretion pathway protein M (EpsM) periplasmic domain-related | T: General secretion pathway protein M (EpsM) periplasmic domain-related | F: GATase_2 | ECOD (v294.1) |
| E | Ribonuc_L-PSP | e3d54E4 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Ribonuc_L-PSP | ECOD (v294.1) |
| A | EF-hand_1,S_100 | e3d54A1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | F: EF-hand_1,S_100 | ECOD (v294.1) |
| A | GATase_2 | e3d54A2 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: General secretion pathway protein M (EpsM) periplasmic domain-related | T: General secretion pathway protein M (EpsM) periplasmic domain-related | F: GATase_2 | ECOD (v294.1) |
| A | Ribonuc_L-PSP | e3d54A4 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Ribonuc_L-PSP | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF13507 | CobB/CobQ-like glutamine amidotransferase domain (GATase_5) | CobB/CobQ-like glutamine amidotransferase domain | This family captures members that are not found in Pfam:PF00310, Pfam:PF07685 and Pfam:PF13230. | Domain | |
| PF02700 | Phosphoribosylformylglycinamidine (FGAM) synthase (PurS) | Phosphoribosylformylglycinamidine (FGAM) synthase | - | Family | |
| PF16904 | Phosphoribosylformylglycinamidine synthase II C-terminus (PurL_C) | Phosphoribosylformylglycinamidine synthase II C-terminus | This is the C-terminal domain of phosphoribosylformylglycinamidine synthase II in Thermatoga and related species [1]. | Domain | |
| PF02769 | AIR synthase related protein, C-terminal domain (AIRS_C) | AIR synthase related protein, C-terminal domain | This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The function of the C-terminal domain of ... | Domain | |
| PF18072 | Formylglycinamide ribonucleotide amidotransferase linker domain (FGAR-AT_linker) | Formylglycinamide ribonucleotide amidotransferase linker domain | This is the linker domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT), also known as Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3), PurL and formylglycinamidine ribonucleotide (FGAM) synthase. This enzyme catalyzes ... | Domain | |
| PF00586 | AIR synthase related protein, N-terminal domain (AIRS) | AIR synthase related protein, N-terminal domain | This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The N-terminal domain of AIR synthase fo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029062 | Class I glutamine amidotransferase-like | Homologous Superfamily | |
| IPR010075 | Phosphoribosylformylglycinamidine synthase subunit PurQ | Family | |
| IPR036604 | Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily | Homologous Superfamily | |
| IPR003850 | Phosphoribosylformylglycinamidine synthase subunit PurS | Family | |
| IPR041609 | Phosphoribosylformylglycinamidine synthase, linker domain | Domain | |
| IPR036676 | PurM-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR010918 | PurM-like, C-terminal domain | Domain | |
| IPR010074 | Phosphoribosylformylglycinamidine subunit PurL | Family | |
| IPR031652 | Phosphoribosylformylglycinamidine subunit PurL, C-terminal | Domain | |
| IPR038411 | PurL, C-terminal domain superfamily | Homologous Superfamily | |
| IPR016188 | PurM-like, N-terminal domain | Domain | |
| IPR036921 | PurM-like, N-terminal domain superfamily | Homologous Superfamily |














