Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Id3d54i1 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Id3d54i3 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 2 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Id3d54i4 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 4 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ed3d54e1 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ed3d54e3 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 2 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ed3d54e4 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 4 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad3d54a1 Alpha and beta proteins (a+b) Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad3d54a3 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 2 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)
Ad3d54a4 Alpha and beta proteins (a+b) PurM C-terminal domain-like PurM C-terminal domain-like PurM C-terminal domain-like Phosphoribosylformylglycinamidine synthase II, domain 4 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPurS-like 8043168 3000512 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPurM N-terminal domain-like 8042411 3001759 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPurM C-terminal domain-like 8042412 3000696 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPurM N-terminal domain-like 8042410 3001759 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyPurM C-terminal domain-like 8042413 3000696 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPurM C-terminal domain-like 8042413 3000696 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPurM N-terminal domain-like 8042411 3001759 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPurM N-terminal domain-like 8042410 3001759 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPurM C-terminal domain-like 8042412 3000696 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPurM N-terminal domain-like 8042410 3001759 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPurM C-terminal domain-like 8042412 3000696 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPurM C-terminal domain-like 8042413 3000696 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPurM N-terminal domain-like 8042411 3001759 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LRasGEFe3d54L1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
HRasGEFe3d54H1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
DPhage_endo_Ie3d54D1 A: a/b three-layered sandwichesX: Profilin-likeH: sensor domainsT: sensor domainsF: Phage_endo_IECOD (v294.1)
GRasGEFe3d54G1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
KRasGEFe3d54K1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
JRasGEFe3d54J1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
FRasGEFe3d54F1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
CRasGEFe3d54C1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: RasGEFECOD (v294.1)
BAA_kinasee3d54B1 A: a/b three-layered sandwichesX: Profilin-likeH: sensor domainsT: sensor domainsF: AA_kinaseECOD (v294.1)
IEF-hand_1,S_100e3d54I1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F: EF-hand_1,S_100ECOD (v294.1)
IGATase_2e3d54I2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: General secretion pathway protein M (EpsM) periplasmic domain-relatedT: General secretion pathway protein M (EpsM) periplasmic domain-relatedF: GATase_2ECOD (v294.1)
IRibonuc_L-PSPe3d54I4 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Ribonuc_L-PSPECOD (v294.1)
EEF-hand_1,S_100e3d54E1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F: EF-hand_1,S_100ECOD (v294.1)
EGATase_2e3d54E2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: General secretion pathway protein M (EpsM) periplasmic domain-relatedT: General secretion pathway protein M (EpsM) periplasmic domain-relatedF: GATase_2ECOD (v294.1)
ERibonuc_L-PSPe3d54E4 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Ribonuc_L-PSPECOD (v294.1)
AEF-hand_1,S_100e3d54A1 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F: EF-hand_1,S_100ECOD (v294.1)
AGATase_2e3d54A2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: General secretion pathway protein M (EpsM) periplasmic domain-relatedT: General secretion pathway protein M (EpsM) periplasmic domain-relatedF: GATase_2ECOD (v294.1)
ARibonuc_L-PSPe3d54A4 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: Ribonuc_L-PSPECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
H3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
D3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
G3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
K3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
J3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
F3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
C3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
B3.30.1280.10 Alpha Beta 2-Layer Sandwich Mth169 Chain: A ,CATH (4.3.0)
I3.90.650.10 Alpha Beta Alpha-Beta Complex Phosphoribosyl-aminoimidazole Synthetase Chain A, domain 2CATH (4.3.0)
I3.30.1330.10 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
I3.30.70.1670 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Formylglycinamide ribonucleotide amidotransferase, C-terminal domainCATH (4.3.0)
E3.90.650.10 Alpha Beta Alpha-Beta Complex Phosphoribosyl-aminoimidazole Synthetase Chain A, domain 2CATH (4.3.0)
E3.30.1330.10 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
E3.30.70.1670 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Formylglycinamide ribonucleotide amidotransferase, C-terminal domainCATH (4.3.0)
A3.90.650.10 Alpha Beta Alpha-Beta Complex Phosphoribosyl-aminoimidazole Synthetase Chain A, domain 2CATH (4.3.0)
A3.30.1330.10 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)
A3.30.70.1670 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Formylglycinamide ribonucleotide amidotransferase, C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D, H, L
PF13507CobB/CobQ-like glutamine amidotransferase domain (GATase_5)CobB/CobQ-like glutamine amidotransferase domainThis family captures members that are not found in Pfam:PF00310, Pfam:PF07685 and Pfam:PF13230. Domain
B, C, F, G, J
PF02700Phosphoribosylformylglycinamidine (FGAM) synthase (PurS)Phosphoribosylformylglycinamidine (FGAM) synthase- Family
A, E, I
PF16904Phosphoribosylformylglycinamidine synthase II C-terminus (PurL_C)Phosphoribosylformylglycinamidine synthase II C-terminusThis is the C-terminal domain of phosphoribosylformylglycinamidine synthase II in Thermatoga and related species [1]. Domain
A, E, I
PF02769AIR synthase related protein, C-terminal domain (AIRS_C)AIR synthase related protein, C-terminal domainThis family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The function of the C-terminal domain of ...This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The function of the C-terminal domain of AIR synthase is unclear, but the cleft formed between N and C domains is postulated as a sulphate binding site [1].
Domain
A, E, I
PF18072Formylglycinamide ribonucleotide amidotransferase linker domain (FGAR-AT_linker)Formylglycinamide ribonucleotide amidotransferase linker domainThis is the linker domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT), also known as Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3), PurL and formylglycinamidine ribonucleotide (FGAM) synthase. This enzyme catalyzes ...This is the linker domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT), also known as Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3), PurL and formylglycinamidine ribonucleotide (FGAM) synthase. This enzyme catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. The structure analysis of Salmonella typhimurium FGAR-AT reveals that this linker domain is made up of a long hydrophilic belt with an extended conformation [4].
Domain
A, E, I
PF00586AIR synthase related protein, N-terminal domain (AIRS)AIR synthase related protein, N-terminal domainThis family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The N-terminal domain of AIR synthase fo ...This family includes Hydrogen expression/formation protein HypE Swiss:P24193, AIR synthases Swiss:P08178 EC:6.3.3.1, FGAM synthase Swiss:P35852 EC:6.3.5.3 and selenide, water dikinase Swiss:P16456 EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, H, L
Phosphoribosylformylglycinamidine synthase 1
B, C, F, G, J
Formylglycinamide ribonucleotide amidotransferase
A, E, I
Phosphoribosylformylglycinamidine synthase II