Crystal structure of putative NADP oxidoreductase BF3122 from Bacteroides fragilis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8090780 | 3000048 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | TM1727-like | 8045487 | 4000116 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | 6-phosphogluconate dehydrogenase-like | 8090780 | 3000048 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | DUF2520 | e3d1lB1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: DUF2520 | ECOD (1.6) |
| B | Rossmann-like | e3d1lB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Rossmann-like | ECOD (1.6) |
| A | DUF2520 | e3d1lA2 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: DUF2520 | ECOD (1.6) |
| A | Rossmann-like | e3d1lA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: Rossmann-like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| B | 1.10.1040.20 | Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase | domain 2 | CATH (4.3.0) |
| A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| A | 1.10.1040.20 | Mainly Alpha | Orthogonal Bundle | N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03807 | NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) | NADP oxidoreductase coenzyme F420-dependent | - | Family | |
| PF10728 | Domain of unknown function (DUF2520) (DUF2520) | Domain of unknown function (DUF2520) | This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
| IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR018931 | Domain of unknown function DUF2520 | Domain | |
| IPR037108 | TM1727-like, C-terminal domain superfamily | Homologous Superfamily | |
| IPR028939 | Pyrroline-5-carboxylate reductase, catalytic, N-terminal | Domain |














