3CZ3 | pdb_00003cz3

Crystal structure of Tomato Aspermy Virus 2b in complex with siRNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth D]Methyltransf_25e3cz3D1 A: alpha arraysX: HTHH: NudixT: NudixF: Methyltransf_25ECOD (v295)
G [auth C]Methyltransf_25e3cz3C1 A: alpha arraysX: HTHH: NudixT: NudixF: Methyltransf_25ECOD (v295)
F [auth B]Methyltransf_25e3cz3B1 A: alpha arraysX: HTHH: NudixT: NudixF: Methyltransf_25ECOD (v295)
E [auth A]DUF3244e3cz3A1 A: alpha arraysX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: DUF3244ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth D]1.20.5.3800 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
G [auth C]1.20.5.3800 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F [auth B]1.20.5.3800 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
E [auth A]1.20.5.3800 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth A],
F [auth B],
G [auth C],
H [auth D]		Protein 2b
B [auth F],
D [auth H]		RNA (5'-R(P*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*G)-3')---
A [auth E],
C [auth G]		RNA (5'-R(P*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*A)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR004946Cucumovirus protein 2BFamily