3CN6 | pdb_00003cn6

Crystal structure of the Spinach Aquaporin SoPIP2;1 S274E mutant

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3cn6b_ Membrane and cell surface proteins and peptides Aquaporin-like Aquaporin-like automated matches automated matches Spinach (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Ad3cn6a_ Membrane and cell surface proteins and peptides Aquaporin-like Aquaporin-like automated matches automated matches Spinach (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyAquaporin-like 8072772 3000508 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAquaporin-like 8072772 3000508 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIRSe3cn6B1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: IRSECOD (v294.1)
AIRSe3cn6A1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: IRSECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)
A1.20.1080.10 Mainly Alpha Up-down Bundle Glycerol uptake facilitator protein Glycerol uptake facilitator protein.CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00230Major intrinsic protein (MIP)Major intrinsic protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Aquaporin -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR022357Major intrinsic protein, conserved siteConserved Site
A, B
IPR034294Aquaporin transporterFamily
A, B
IPR023271Aquaporin-likeHomologous Superfamily
A, B
IPR000425Major intrinsic proteinFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALChannels: Aquaporins and GlyceroporinsPIP2;1 plant aquaporin, S115E mutant